Evidence map›Paper›PMID 15988567›Full record

ArticlePlant molecular biology2005

Translation initiation factors eIF4E and eIFiso4E are required for polysome formation and regulate plant growth in tobacco.

Jonathan P Combe, Marie E Petracek, Gerben van Eldik, Frank Meulewaeter, David Twell

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. CRISPR/Cas-Mediated Resistance against Viruses in Plants.International journal of molecular sciences · 2022
    Review
  5. CRISPR-Cas9 Targeting of theFrontiers in microbiology · 2022
    Article
  6. Mutation of barleyFrontiers in plant science · 2022
    Article
  7. eIF4E1 RegulatesFrontiers in plant science · 2022
    Article
  8. Loss-of-function ofBreeding science · 2021
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 4 countries.

Jonathan P CombeDepartment of Biology, University of Leicester, LE1 7RH Leicester, United Kingdom.
Marie E Petracek
Gerben van Eldik
Frank Meulewaeter
David Twell
University of Leicester · GBBayer (Belgium) · BEBayer (Germany) · DEOklahoma State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Eukaryotic initiation factor eIF4E plays a pivotal role in translation initiation. As a component of the ternary eIF4F complex, eIF4E interacts with the mRNA cap structure to facilitate recruitment of the 40S ribosomal subunit onto mRNA. Plants contain two distinct cap-binding proteins, eIF4E and eIFiso4E, that assemble into different eIF4F complexes. To study the functional roles of eIF4E and eIFiso4E in tobacco, we isolated two corresponding cDNAs, NteIF4E1 and NteIFiso4E1, and used these to deplete cap-binding protein levels in planta by antisense downregulation. Antibodies raised against recombinant NteIF4E1 detected three distinct cap-binding proteins in tobacco leaf extracts; NteIF4E and two isoforms of NteIFiso4E. The three cap-binding proteins were immuno-detected in all tissues analysed and were coordinately regulated, with peak expression in anthers and pollen. Transgenic tobacco plants showing significant depletion of either NteIF4E or the two NteIFiso4E isoforms displayed normal vegetative development and were fully fertile. Interestingly, NteIFiso4E depletion resulted in a compensatory increase in NteIF4E levels, whereas the down-regulation of NteIF4E did not trigger a reciprocal increase in NteIFiso4E levels. The antisense depletion of both NteIF4E and NteIFiso4E resulted in plants with a semi-dwarf phenotype and an overall reduction in polyribosome loading, demonstrating that both eIF4E and eIFiso4E support translation initiation in planta, which suggests their potential role in the regulation of plant growth.

Indexed as

Amino Acid SequenceBlotting, WesternDNA, AntisenseDNA, ComplementaryDown-RegulationEukaryotic Initiation Factor-4EGenetic VectorsMolecular Sequence DataNicotianaPhylogenyPlants, Genetically ModifiedPolyribosomesProtein IsoformsSequence AlignmentSequence Homology, Amino AcidDNA, AntisenseDNA, ComplementaryEukaryotic Initiation Factor-4EProtein Isoforms

Identifiers

PMID15988567
OpenAlexW2035483007

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.