Evidence map›Paper›PMID 15988020›Full record

ArticleMolecular and cellular biology2005

Differential recognition of response elements determines target gene specificity for p53 and p63.

Motonobu Osada, Hannah Lui Park, Yuichi Nagakawa, Keishi Yamashita, Alexey Fomenkov, Myoung Sook Kim, Guojun Wu, Shuji Nomoto, Barry Trink, David Sidransky

Open access · greenAbstract readComparative Study
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
6.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 135 citations in OpenAlex.

  1. Article
  2. The dual role of p63 in cancer.Frontiers in oncology · 2023
    Review
  3. Article
  4. Article
  5. Structural diversity of p63 and p73 isoforms.Cell death and differentiation · 2022
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Molecular Mechanisms of p63-Mediated Squamous Cancer Pathogenesis.International journal of molecular sciences · 2019
    Review
  16. Article
  17. Article
  18. A double dealing tale of p63: an oncogene or a tumor suppressor.Cellular and molecular life sciences : CMLS · 2018
    Review
  19. Article
  20. Review

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Motonobu OsadaDepartment of Otolaryngology, Division of Head and Neck Surgery, Johns Hopkins University School of Medicine, 818 Ross Research Building, 720 Rutland Avenue, Baltimore, Maryland 21205, USA.
Hannah Lui Park
Yuichi Nagakawa
Keishi Yamashita
Alexey Fomenkov
Myoung Sook Kim
Guojun Wu
Shuji Nomoto
Barry Trink
David Sidransky
Johns Hopkins University · USJohns Hopkins Medicine · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

p63 is a member of the p53 tumor suppressor gene family, which regulates downstream target gene expression by binding to sequence-specific response elements similar to those of p53. By using oligonucleotide expression microarray analysis and analyzing the promoters of p63-induced genes, we have identified novel p63-specific response elements (p63-REs) in the promoter regions of EVPL and SMARCD3. These p63-REs exhibit characteristic differences from the canonical p53-RE (RRRCWWGYYY) in both the core-binding element (CWWG) as well as the RRR and/or YYY stretches. Luciferase assays on mutagenized promoter constructs followed by electromobility shift analysis showed that p53 preferentially activates and binds to the RRRCATGYYY sequence, whereas p63 preferentially activates RRRCGTGYYY. Whereas EVPL protein is highly expressed in epithelial cells of the skin and pharynx in the p63+/+ mouse, it is undetectable in these tissues in the p63-/- mouse. Our results indicate that p63 can regulate expression of specific target genes such as those involved in skin, limb, and craniofacial development by preferentially activating distinct p63-specific response elements.

Indexed as

Gene Expression Regulation, DevelopmentalAmino Acid SequenceAnimalsBase SequenceBone DevelopmentChromosomal Proteins, Non-HistoneDNA-Binding ProteinsGenes, ReporterGenes, Tumor SuppressorHumansMembrane ProteinsMiceMolecular Sequence DataMutationOligonucleotide Array Sequence AnalysisPharynxChromosomal Proteins, Non-HistoneDNA-Binding ProteinsenvoplakinMembrane ProteinsPhosphoproteinsProtein PrecursorsSMARCD3 protein, humanTP63 protein, humanTrans-ActivatorsTranscription FactorsTumor Suppressor Protein p53Tumor Suppressor Proteins

Identifiers

PMID15988020
PMCPMC1168821
OpenAlexW2059021008

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.