Evidence map›Paper›PMID 15987787›Full record

ArticleNucleic acids research2005

Conditional knockdown of Fgfr2 in mice using Cre-LoxP induced RNA interference.

Xavier Coumoul, Vivek Shukla, Cuiling Li, Rui-Hong Wang, Chu-Xia Deng

Open access · goldAbstract readValidation Study
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 91 citations in OpenAlex.

  1. Osteocyte Death and Bone Overgrowth in Mice Lacking Fibroblast Growth Factor Receptors 1 and 2 in Mature Osteoblasts and Osteocytes.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2019
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  14. Extracellular matrix degradation and remodeling in development and disease.Cold Spring Harbor perspectives in biology · 2011
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  20. GEP, a local growth factor, is critical for odontogenesis and amelogenesis.International journal of biological sciences · 2010
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xavier CoumoulGenetics of Development and Disease Branch, 10/9N105, National Institute of Diabetes, Digestive and Kidney Diseases, National Institutes of Health Bethesda, Maryland, MD 20892, USA.
Vivek Shukla
Cuiling Li
Rui-Hong Wang
Chu-Xia Deng
National Institute of Diabetes and Digestive and Kidney Diseases · US

Funding

Brca1 in development and tumorigenesisZIADK056001 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI DENG, CHUXIA · 2009 to 2012
$2.2M
Fibroblast Growth Factor ReceptorZ01DK056001 · NIDDK · NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES · PI DENG, CHUXIA · 1999 to 2008
$1.0M
6 · The paper itself

Abstract

RNA interference (RNAi)-mediated gene knockdown is a potent approach for studying gene function. We have previously reported a plasmid-based, tamoxifen-inducible gene knockdown system in cultured cells using a combined RNAi and Cre-LoxP system. Here, we validate this system in mouse and show that it can be used to suppress the expression of an endogenous gene (Fgfr2) with high efficiency. We show that transgenic mice carrying the U6-ploxPneo-Fgfr2 RNAi construct are normal, displaying Fgfr2 transcripts equivalent to those of wild-type controls, indicating that the U6 promoter is inactive in vivo due to the presence of the neo in the promoter. After excision of the neo by crossing with transgenic mice that express Cre in the mouse germline, the U6 promoter is activated, leading to over 95% reduction of Fgfr2 transcripts, and consequently, embryonic lethality. On the other hand, activation of the U6 promoter using transgenic mice that express Cre in the progress zone of the limb results in live mice with malformation of digits of both the forelimbs and hindlimbs. This method provides a fast, yet efficient way to decipher gene functions in vivo in a tissue-specific manner.

Indexed as

RNA InterferenceAnimalsGenes, LethalIntegrasesLimb Deformities, CongenitalMesodermMiceMice, KnockoutReceptor, Fibroblast Growth Factor, Type 2Receptor Protein-Tyrosine KinasesReceptors, Fibroblast Growth FactorRecombination, GeneticRNA Polymerase IIIViral ProteinsCre recombinaseFgfr2 protein, mouseIntegrasesReceptor, Fibroblast Growth Factor, Type 2Receptor Protein-Tyrosine KinasesReceptors, Fibroblast Growth FactorRNA Polymerase IIIViral Proteins

Identifiers

PMID15987787
PMCPMC1159121
OpenAlexW2012078505

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.