Evidence map›Paper›PMID 15984913›Full record

ArticlePLoS biology2005

The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite.

Hiroyuki Ogata, Patricia Renesto, Stéphane Audic, Catherine Robert, Guillaume Blanc, Pierre-Edouard Fournier, Hugues Parinello, Jean-Michel Claverie, Didier Raoult

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 137 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
137citing papers in PubMed, 1 pooled it
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

137 citing papers in PubMed, 1 synthesis or guideline pooled it, 275 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. PathogenicJournal of bacteriology · 2024
    Review
  7. TheApplied and environmental microbiology · 2024
    Article
  8. Review
  9. Analysis of the Type 4 Effectome across the GenusInternational journal of molecular sciences · 2022
    Article
  10. Infection and immunity · 2022
    Review
  11. Examination of Rickettsial Host Range for Shuttle Vectors Based onApplied and environmental microbiology · 2022
    Article
  12. Culture Isolate ofInternational journal of environmental research and public health · 2022
    Article
  13. Article
  14. Characterization of a novel transitional groupInternational journal of systematic and evolutionary microbiology · 2021
    Article
  15. Article
  16. Review
  17. Crystal structure of acetoacetyl-CoA reductase from Rickettsia felis.Acta crystallographica. Section F, Structural biology communications · 2021
    Article
  18. Cat fleas (Current research in parasitology & vector-borne diseases · 2021
    Article
  19. Article
  20. Article

77 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Hiroyuki OgataStructural and Genomic Information Laboratory, UPR 2589, IBSM, CNRS, Marseille Cedex, France. Hiroyuki.Ogata@igs.cnrs-mrs.fr
Patricia Renesto
Stéphane Audic
Catherine Robert
Guillaume Blanc
Pierre-Edouard Fournier
Hugues Parinello
Jean-Michel Claverie
Didier Raoult
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We sequenced the genome of Rickettsia felis, a flea-associated obligate intracellular alpha-proteobacterium causing spotted fever in humans. Besides a circular chromosome of 1,485,148 bp, R. felis exhibits the first putative conjugative plasmid identified among obligate intracellular bacteria. This plasmid is found in a short (39,263 bp) and a long (62,829 bp) form. R. felis contrasts with previously sequenced Rickettsia in terms of many other features, including a number of transposases, several chromosomal toxin-antitoxin genes, many more spoT genes, and a very large number of ankyrin- and tetratricopeptide-motif-containing genes. Host-invasion-related genes for patatin and RickA were found. Several phenotypes predicted from genome analysis were experimentally tested: conjugative pili and mating were observed, as well as beta-lactamase activity, actin-polymerization-driven mobility, and hemolytic properties. Our study demonstrates that complete genome sequencing is the fastest approach to reveal phenotypic characters of recently cultured obligate intracellular bacteria.

Indexed as

Genome, BacterialAcclimatizationAntigens, SurfaceChromosome MappingDNA, BacterialGenes, BacterialGenomicsMicroscopy, Electron, TransmissionMolecular Sequence DataOpen Reading FramesPhenotypePlasmidsRickettsia felisSequence Homology, Nucleic AcidAntigens, SurfaceDNA, Bacterial

Identifiers

PMID15984913
PMCPMC1166351
OpenAlexW2036372901

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.