Evidence map›Paper›PMID 15980353›Full record

ArticleAntimicrobial agents and chemotherapy2005

Sixteen homologs of the mex-type multidrug resistance efflux pump in Bacteroides fragilis.

Ohmi Ueda, Hannah M Wexler, Kaname Hirai, Yukinaga Shibata, Fuminobu Yoshimura, Setsuo Fujimura

Abstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 44 citations in OpenAlex.

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  16. Bacteroides: the good, the bad, and the nitty-gritty.Clinical microbiology reviews · 2007
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Ohmi UedaDepartment of Oral Microbiology, Matsumoto Dental University, 1780 Gobara Hirooka Shiojiri, Nagano 399-0781, Japan. volvo70@po.mdu.ac.jp
Hannah M Wexler
Kaname Hirai
Yukinaga Shibata
Fuminobu Yoshimura
Setsuo Fujimura
Matsumoto Dental University · JPAichi Gakuin University · JPWadsworth Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sixteen homologs of multidrug resistance efflux pump operons of the resistance-nodulation-cell division (RND) family were found in the Bacteroides fragilis genome sequence by homology searches. Disruption mutants were made to the mexB homologs of the four genes most similar to Pseudomonas aeruginosa mexB. Reverse transcription-PCR was conducted and indicated that the genes were transcribed in a polycistronic fashion and that the promoter was upstream of bmeA (the mexA homolog). One of these disruption mutants (in bmeB, the mexB homolog) was more susceptible than the parental strain to certain cephems, polypeptide antibiotics, fusidic acid, novobiocin, and puromycin. The gene for this homolog and the adjacent upstream gene, bmeA, were cloned in a hypersensitive Escherichia coli host. The resultant transformants carrying B. fragilis bmeAB were more resistant to certain agents; these agents also had lower MICs for the B. fragilis bmeB disruption mutants than for the parental strain. The putative efflux pump operon is composed of bmeA, bmeB, and bmeC (a putative outer membrane channel protein homologous with OprM). Addition of the efflux pump inhibitors, carbonyl cyanide m-chlorophenylhydrazone (a proton conductor that eliminates the energy source) and Phe-Arg beta-naphthylamide (MC-207,110) (the first specific inhibitor described for RND pumps in P. aeruginosa), resulted in lowered MICs in the parental strain but not in the bmeB disruption mutant, indicating that the bmeB pump is affected by these inhibitors. This is the first description of RND type pumps in the genus Bacteroides.

Indexed as

Sequence Homology, Amino AcidAmino Acid SequenceAnti-Bacterial AgentsBacterial Outer Membrane ProteinsBacteroides fragilisDrug Resistance, Multiple, BacterialMembrane Transport ProteinsMicrobial Sensitivity TestsMolecular Sequence DataMutationAnti-Bacterial AgentsBacterial Outer Membrane ProteinsMembrane Transport ProteinsMexB protein, Pseudomonas aeruginosa

Identifiers

PMID15980353
PMCPMC1168660
OpenAlexW2112790264

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.