Evidence map›Paper›PMID 15975903›Full record

ArticleMolecular biology of the cell2005

Alanine scanning of Arp1 delineates a putative binding site for Jnm1/dynamitin and Nip100/p150Glued.

Sean W Clark, Mark D Rose

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Dynactin function in mitotic spindle positioning.Traffic (Copenhagen, Denmark) · 2008
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sean W ClarkDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544, USA.
Mark D Rose
Princeton University · US

Funding

ONCOLOGY: MOLECULAR BASIS OF CANCERT32CA009528 · NCI · PRINCETON UNIVERSITY · PI BROACH, JAMES R. · 1985 to 2010
$5.9M
GENETICS OF THE YEAST MICROTUBULE ORGANIZING CENTERR01GM052526 · NIGMS · PRINCETON UNIVERSITY · PI ROSE, MARK DAVID · 1995 to 2003
$1.0M
NCI NIH HHS CA09528NCI NIH HHS T32 CA009528NIGMS NIH HHS GM-52526NIGMS NIH HHS R01 GM052526
6 · The paper itself

Abstract

Arp1p is the only actin-related protein (ARP) known to form actin-like filaments. Unlike actin, Arp1p functions with microtubules, as part of the dynein regulator, dynactin. Arp1p's dissimilar functions imply interactions with a distinct set of proteins. To distinguish surface features relating to Arp1p's core functions and to identify the footprint of protein interactions essential for dynactin function, we performed the first complete charge-cluster-to-alanine scanning mutagenesis of an ARP and compared the results with a similar study of actin. The Arp1p mutations revealed three nonoverlapping surfaces with distinct genetic properties. One of these surfaces encompassed a region unique to Arp1p that is crucial for Jnm1p (dynamitin/p50) and Nip100p (p150(Glued)) association as well as pointed-end associations. Unlike the actin mutations, none of the ARP1 alleles disrupt filament formation; however, one pointed-end allele delayed the elution of Arp1p on gel filtration, consistent with loss of additional subunits.

Indexed as

ActinsAlanineAllelesBase SequenceCytoskeletal ProteinsDynactin ComplexMicrotubule-Associated ProteinsMolecular Sequence DataMutationNucleotidesPhenotypeProtein Structure, TertiarySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAct1 protein, S cerevisiaeActinsAlanineARP1 protein, S cerevisiaeCytoskeletal ProteinsDynactin ComplexJNM1 protein, S cerevisiaeMicrotubule-Associated ProteinsNIP100 protein, S cerevisiaeNucleotidesSaccharomyces cerevisiae Proteins

Identifiers

PMID15975903
PMCPMC1196314
OpenAlexW2170137082

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.