Evidence map›Paper›PMID 15973435›Full record

ArticleThe EMBO journal2005

Regulation of hepatic metabolic pathways by the orphan nuclear receptor SHP.

Konstantinos Boulias, Nitsa Katrakili, Krister Bamberg, Peter Underhill, Andy Greenfield, Iannis Talianidis

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 143 citations in OpenAlex.

  1. Article
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  5. Exploring the nexus of nuclear receptors in hematological malignancies.Cellular and molecular life sciences : CMLS · 2024
    Review
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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

Konstantinos BouliasInstitute of Molecular Biology and Biotechnology, Foundation for Research and Technology Hellas, Herakleion Crete, Greece.
Nitsa Katrakili
Krister Bamberg
Peter Underhill
Andy Greenfield
Iannis Talianidis
Foundation for Research and Technology Hellas · GRMary Lyon Centre at MRC Harwell · GBAstraZeneca (Sweden) · SE

Funding

Medical Research Council MC_U142684167
6 · The paper itself

Abstract

SHP (small heterodimer partner) is an important component of the feedback regulatory cascade, which controls the conversion of cholesterol to bile acids. In order to identify the bona fide molecular targets of SHP, we performed global gene expression profiling combined with chromatin immunoprecipitation assays in transgenic mice constitutively expressing SHP in the liver. We demonstrate that SHP affects genes involved in diverse biological pathways, and in particular, several key genes involved in consecutive steps of cholesterol degradation, bile acid conjugation, transport and lipogenic pathways. Sustained expression of SHP leads to the depletion of hepatic bile acid pool and a concomitant accumulation of triglycerides in the liver. The mechanism responsible for this phenotype includes SHP-mediated direct repression of downstream target genes and the bile acid sensor FXRalpha, and an indirect activation of PPARgamma and SREBP-1c genes. We present evidence for the role of altered chromatin configurations in defining distinct gene-specific mechanisms by which SHP mediates differential transcriptional repression. The multiplicity of genes under its control suggests that SHP is a pleiotropic regulator of diverse metabolic pathways.

Indexed as

AnimalsGene Expression RegulationLiverMiceMice, TransgenicReceptors, Cytoplasmic and NuclearRepressor ProteinsRNA, Messengernuclear receptor subfamily 0, group B, member 2Receptors, Cytoplasmic and NuclearRepressor ProteinsRNA, Messenger

Identifiers

PMID15973435
PMCPMC1176456
OpenAlexW2101842666

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.