ArticleGenetics2005
A genetic linkage map for the tiger pufferfish, Takifugu rubripes.
Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
30 citing papers in PubMed, 99 citations in OpenAlex.
- Fuelled by creatine: exploring two copies of the creatine transporter SLC6A8 gene in rainbow trout.Fish physiology and biochemistry · 2026Article
- Feeding Strategy to Use Beef Tallow and Modify Farmed Tiger Puffer Fatty Acid Composition.Animals : an open access journal from MDPI · 2023Article
- Genome-Scale Phylogenetic and Population Genetic Studies Provide Insight Into Introgression and Adaptive Evolution ofFrontiers in genetics · 2021Article
- Article
- Improvement of the Pacific bluefin tuna (Thunnus orientalis) reference genome and development of male-specific DNA markers.Scientific reports · 2019Article
- A highly flexible and repeatable genotyping method for aquaculture studies based on target amplicon sequencing using next-generation sequencing technology.Scientific reports · 2019Article
- Exaggerated heterochiasmy in a fish with sex-linked male coloration polymorphisms.Proceedings of the National Academy of Sciences of the United States of America · 2019Article
- Review
- Restriction site-associated DNA sequencing for SNP discovery and high-density genetic map construction in southern catfish (Royal Society open science · 2018Article
- Article
- Comparative mapping for bighead carp (Aristichthys nobilis) against model and non-model fishes provides insights into the genomic evolution of cyprinids.Molecular genetics and genomics : MGG · 2015Article
- First haploid genetic map based on microsatellite markers in Senegalese sole (Solea senegalensis, Kaup 1858).Marine biotechnology (New York, N.Y.) · 2015Article
- A RAD-based linkage map and comparative genomics in the gudgeons (genus Gnathopogon, Cyprinidae).BMC genomics · 2013Article
- An Expressed Sequence Tag (EST)-enriched genetic map of turbot (Scophthalmus maximus): a useful framework for comparative genomics across model and farmed teleosts.BMC genetics · 2012Article
- Article
- A trans-species missense SNP in Amhr2 is associated with sex determination in the tiger pufferfish, Takifugu rubripes (fugu).PLoS genetics · 2012Article
- Article
- Genetic diversity of microsatellite loci in hierarchically structured populations.Theoretical population biology · 2011Article
- Integration of the genetic map and genome assembly of fugu facilitates insights into distinct features of genome evolution in teleosts and mammals.Genome biology and evolution · 2011Article
- A consensus linkage map of the grass carp (Ctenopharyngodon idella) based on microsatellites and SNPs.BMC genomics · 2010Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
10 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The compact genome of the tiger pufferfish, Takifugu rubripes (fugu), has been sequenced to the "draft" level and annotated to identify all the genes. However, the assembly of the draft genome sequence is highly fragmented due to the lack of a genetic or a physical map. To determine the long-range linkage relationship of the sequences, we have constructed the first genetic linkage map for fugu. The maps for the male and female spanning 697.1 and 1213.5 cM, respectively, were arranged into 22 linkage groups by markers heterozygous in both parents. The resulting map consists of 200 microsatellite loci physically linked to genome sequences spanning approximately 39 Mb in total. Comparisons of the genome maps of fugu, other teleosts, and mammals suggest that syntenic relationship is more conserved in the teleost lineage than in the mammalian lineage. Map comparisons also show a pufferfish lineage-specific rearrangement of the genome resulting in colocalization of two Hox gene clusters in one linkage group. This map provides a foundation for development of a complete physical map, a basis for comparison of long-range linkage of genes with other vertebrates, and a resource for mapping loci responsible for phenotypic differences among Takifugu species.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.