ArticleGenetics2005
Phenotypic selection for dormancy introduced a set of adaptive haplotypes from weedy into cultivated rice.
Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
14 citing papers in PubMed, 42 citations in OpenAlex.
- Identification and characterization of An-4, a potential quantitative trait locus for awn development in rice.BMC plant biology · 2021Article
- Unveiling the Actual Functions of Awns in Grasses: From Yield Potential to Quality Traits.International journal of molecular sciences · 2020Review
- Morphological and Genetic Mechanisms Underlying Awn Development in Monocotyledonous Grasses.Genes · 2019Review
- Two Contrasting Patterns and Underlying Genes for Coadaptation of Seed Dormancy and Flowering Time in Rice.Scientific reports · 2018Article
- Genomewide association analysis for awn length linked to the seed shattering gene qSH1 in rice.Journal of genetics · 2016Article
- Genome-wide association mapping revealed a diverse genetic basis of seed dormancy across subpopulations in rice (Oryza sativa L.).BMC genetics · 2016Article
- Multiple origins of the phenol reaction negative phenotype in foxtail millet, Setaria italica (L.) P. Beauv., were caused by independent loss-of-function mutations of the polyphenol oxidase (Si7PPO) gene during domestication.Molecular genetics and genomics : MGG · 2015Article
- An-1 encodes a basic helix-loop-helix protein that regulates awn development, grain size, and grain number in rice.The Plant cell · 2013Article
- Quantitative trait locus and haplotype analyses of wild and crop-mimic traits in U.S. weedy rice.G3 (Bethesda, Md.) · 2013Article
- Comparative genetic analysis of a wheat seed dormancy QTL with rice and Brachypodium identifies candidate genes for ABA perception and calcium signaling.Functional & integrative genomics · 2011Article
- The qSD12 underlying gene promotes abscisic acid accumulation in early developing seeds to induce primary dormancy in rice.Plant molecular biology · 2010Article
- Independent losses of function in a polyphenol oxidase in rice: differentiation in grain discoloration between subspecies and the role of positive selection under domestication.The Plant cell · 2008Article
- Global dissemination of a single mutation conferring white pericarp in rice.PLoS genetics · 2007Article
- Article
Corrections and comments
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Authors and funding
3 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Association of seed dormancy with shattering, awn, and black hull and red pericarp colors enhances survival of wild and weedy species, but challenges the use of dormancy genes in breeding varieties resistant to preharvest sprouting. A phenotypic selection and recurrent backcrossing technique was used to introduce dormancy genes from a wild-like weedy rice to a breeding line to determine their effects and linkage with the other traits. Five generations of phenotypic selection alone for low germination extremes simultaneously retained dormancy alleles at five independent QTL, including qSD12 (R(2) > 50%), as determined by genome-wide scanning for their main and/or epistatic effects in two BC(4)F(2) populations. Four dormancy loci with moderate to small effects colocated with QTL/genes for one to three of the associated traits. Multilocus response to the selection suggests that these dormancy genes are cumulative in effect, as well as networked by epistases, and that the network may have played a "sheltering" role in maintaining intact adaptive haplotypes during the evolution of weeds. Tight linkage may prevent the dormancy genes from being used in breeding programs. The major effect of qSD12 makes it an ideal target for map-based cloning and the best candidate for imparting resistance to preharvest sprouting.
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