Evidence map›Paper›PMID 15972457›Full record

ArticleGenetics2005

Quantitative trait loci affecting the difference in pigmentation between Drosophila yakuba and D. santomea.

Mary Anna Carbone, Ana Llopart, Matthew deAngelis, Jerry A Coyne, Trudy F C Mackay

Open access · greenAbstract readComparative Study
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Quantifying Abdominal Pigmentation in Drosophila melanogaster.Journal of visualized experiments : JoVE · 2017
    Article
  8. Genetic and Transgenic Reagents forG3 (Bethesda, Md.) · 2017
    Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Evolution of transcriptional enhancers and animal diversity.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2013
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Tinker where the tinkering's good.Trends in genetics : TIG · 2008
    Article
  20. Simpler mode of inheritance of transcriptional variation in male Drosophila melanogaster.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mary Anna CarboneDepartment of Genetics, North Carolina State University, Raleigh 27695, USA. macarbon@unity.ncsu.edu
Ana Llopart
Matthew deAngelis
Jerry A Coyne
Trudy F C Mackay
University of Chicago · USNorth Carolina State University · US

Funding

THEORETICAL QUANTITATIVE GENETICSP01GM045344 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI MACKAY, TRUDY F · 1991 to 2005
$7.2M
GENETIC BASIS OF SPECIES DIFFERENCES IN DROSOPHILAR01GM058260 · NIGMS · UNIVERSITY OF CHICAGO · PI COYNE, JERRY ALLEN · 1998 to 2009
$3.2M
NIGMS NIH HHS GM45344NIGMS NIH HHS GM 58260NIGMS NIH HHS P01 GM045344NIGMS NIH HHS R01 GM058260
6 · The paper itself

Abstract

Using quantitative trait locus (QTL) mapping, we studied the genetic basis of the difference in pigmentation between two sister species of Drosophila: Drosophila yakuba, which, like other members of the D. melanogaster subgroup, shows heavy black pigmentation on the abdomen of males and females, and D. santomea, an endemic to the African island of São Tomé, which has virtually no pigmentation. Here we mapped four QTL with large effects on this interspecific difference in pigmentation: two on the X chromosome and one each on the second and third chromosomes. The same four QTL were detected in male hybrids in the backcrosses to both D. santomea and D. yakuba and in the female D. yakuba backcross hybrids. All four QTL exhibited strong epistatic interactions in male backcross hybrids, but only one pair of QTL interacted in females from the backcross to D. yabuka. All QTL from each species affected pigmentation in the same direction, consistent with adaptive evolution driven by directional natural selection. The regions delimited by the QTL included many positional candidate loci in the pigmentation pathway, including genes affecting catecholamine biosynthesis, melanization of the cuticle, and many additional pleiotropic effects.

Indexed as

AnimalsChromosome MappingCrosses, GeneticEpistasis, GeneticFemaleGenes, InsectGenetic VariationGenotypeHaplotypesHybridization, GeneticMaleQuantitative Trait LociSkin PigmentationSpecies Specificity

Identifiers

PMID15972457
PMCPMC1456512
OpenAlexW2136718912

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.