Evidence map›Paper›PMID 15965244›Full record

ArticleGenetics2005

Identification of a rat model for usher syndrome type 1B by N-ethyl-N-nitrosourea mutagenesis-driven forward genetics.

Bart M G Smits, Theo A Peters, Joram D Mul, Huib J Croes, Jack A M Fransen, Andy J Beynon, Victor Guryev, Ronald H A Plasterk, Edwin Cuppen

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 28 citations in OpenAlex.

  1. Review
  2. Article
  3. Omi, a recessive mutation on chromosome 10, is a novel allele of Ostm1.Mammalian genome : official journal of the International Mammalian Genome Society · 2013
    Article
  4. Article
  5. Article
  6. Genetics in non-genetic model systems.Current opinion in neurobiology · 2012
    Review
  7. Article
  8. Article
  9. Review
  10. A mouse forward genetics screen identifies LISTERIN as an E3 ubiquitin ligase involved in neurodegeneration.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Bart M G SmitsHubrecht Laboratory, Centre for Biomedical Genetics, 3584 CT Utrecht, The Netherlands.
Theo A Peters
Joram D Mul
Huib J Croes
Jack A M Fransen
Andy J Beynon
Victor Guryev
Ronald H A Plasterk
Edwin Cuppen
Hubrecht Institute for Developmental Biology and Stem Cell Research · NLRadboud University Nijmegen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rat is the most extensively studied model organism and is broadly used in biomedical research. Current rat disease models are selected from existing strains and their number is thereby limited by the degree of naturally occurring variation or spontaneous mutations. We have used ENU mutagenesis to increase genetic variation in laboratory rats and identified a recessive mutant, named tornado, showing aberrant circling behavior, hyperactivity, and stereotypic head shaking. More detailed analysis revealed profound deafness due to disorganization and degeneration of the organ of Corti that already manifests at the onset of hearing. We set up a single nucleotide polymorphism (SNP)-based mapping strategy to identify the affected gene, revealing strong linkage to the central region of chromosome 1. Candidate gene resequencing identified a point mutation that introduces a premature stopcodon in Myo7a. Mutations in human MYO7A result in Usher syndrome type 1B, a severe autosomal inherited recessive disease that involves deafness and vestibular dysfunction. Here, we present the first characterized rat model for this disease. In addition, we demonstrate proof of principle for the generation and cloning of human disease models in rat using ENU mutagenesis, providing good perspectives for systematic phenotypic screens in the rat.

Indexed as

Disease Models, AnimalMutagenesisAnimalsChromosome DisordersCodon, TerminatorDyneinsEthylnitrosoureaGenes, RecessiveGenetic LinkageHumansMaleMutagensMyosinsMyosin VIIaPoint MutationPolymorphism, Single NucleotideCodon, TerminatorDyneinsEthylnitrosoureaMutagensMYO7A protein, humanMyo7a protein, ratMyosinsMyosin VIIa

Identifiers

PMID15965244
PMCPMC1449770
OpenAlexW2130938358

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.