ArticlePlant physiology2005
Profile and analysis of gene expression changes during early development in germinating spores of Ceratopteris richardii.
Article in Plant physiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
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Who cites it
32 citing papers in PubMed, 75 citations in OpenAlex.
- Article
- A conserved GRAS-domain transcriptional regulator links meristem indeterminacy to sex determination in Ceratopteris gametophytes.Current biology : CB · 2024Article
- Proteome and Interactome Linked to Metabolism, Genetic Information Processing, and Abiotic Stress in Gametophytes of Two Woodferns.International journal of molecular sciences · 2023Article
- Polarized distribution of extracellular nucleotides promotes gravity-directed polarization of development in spores ofFrontiers in plant science · 2023Article
- Two distinct light-induced reactions are needed to promote germination in spores ofFrontiers in plant science · 2023Article
- The Shared Proteome of the Apomictic FernInternational journal of molecular sciences · 2022Article
- Positional cues and cell division dynamics drive meristem development and archegonium formation in Ceratopteris gametophytes.Communications biology · 2022Article
- Transcriptional analysis ofFrontiers in plant science · 2022Article
- A De Novo Transcriptome Assembly of Ceratopteris richardii Provides Insights into the Evolutionary Dynamics of Complex Gene Families in Land Plants.Genome biology and evolution · 2021Article
- Analysis of pcC13-62 promoters predicts a link between cis-element variations and desiccation tolerance in Linderniaceae.Journal of experimental botany · 2018Article
- Identification and Characterization of TALE Homeobox Genes in the Endangered Fern Vandenboschia speciosa.Genes · 2017Article
- Proteogenomic Analysis Greatly Expands the Identification of Proteins Related to Reproduction in the Apogamous FernFrontiers in plant science · 2017Article
- Cytological and Proteomic Analyses of Osmunda cinnamomea Germinating Spores Reveal Characteristics of Fern Spore Germination and Rhizoid Tip Growth.Molecular & cellular proteomics : MCP · 2015Article
- Between two fern genomes.GigaScience · 2014Review
- New MADS-box gene in fern: cloning and expression analysis of DfMADS1 from Dryopteris fragrans.PloS one · 2014Article
- Article
- Article
- Ceratopteris richardii (C-fern): a model for investigating adaptive modification of vascular plant cell walls.Frontiers in plant science · 2013Article
- Gene expression associated with apogamy commitment in Ceratopteris richardii.Sexual plant reproduction · 2012Article
- De novo characterization of the gametophyte transcriptome in bracken fern, Pteridium aquilinum.BMC genomics · 2011Article
Corrections and comments
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Authors and funding
4 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Analysis of an expressed sequence tag library with more than 5,000 sequences from spores of the fern Ceratopteris richardii reveals that more than 3,900 of them represent distinct genes, and almost 70% of these have significant similarity to Arabidopsis (Arabidopsis thaliana) genes. Eight genes are common between three very different dormant plant systems, Ceratopteris spores, Arabidopsis seeds, and Arabidopsis pollen. We evaluated the pattern of mRNA abundance over the first 48 h of spore development using a microarray of cDNAs representing 3,207 distinct genes of C. richardii and determined the relative levels of RNA abundance for 3,143 of these genes using a Bayesian method of statistical analysis. More than 900 of them (29%) show a significant change between any of the five time points analyzed, and these have been annotated based on their sequence similarity with the Arabidopsis proteome. Novel data arising from these analyses identify genes likely to be critical for the germination and subsequent early development of diverse cells and tissues emerging from dormancy.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.