Evidence map›Paper›PMID 15959806›Full record

ArticleHuman genetics2005

Upstream stimulatory factor 1 associated with familial combined hyperlipidemia, LDL cholesterol, and triglycerides.

Hilary Coon, Yuanpei Xin, Paul N Hopkins, Richard M Cawthon, Sandra J Hasstedt, Steven C Hunt

Abstract read
PubMed Publisher
In one paragraph

Article in Human genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
11.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 79 citations in OpenAlex.

  1. Effects ofFrontiers in cardiovascular medicine · 2022
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Significant association between upstream transcription factor 1 rs2516839 polymorphism and hepatocellular carcinoma risk: a case-control study.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2015
    Article
  8. Article
  9. Thioredoxin Interacting Protein (TXNIP) and Pathogenesis of Diabetic Retinopathy.Journal of clinical & experimental ophthalmology · 2013
    Article
  10. Article
  11. Article
  12. Article
  13. The genetics of familial combined hyperlipidaemia.Nature reviews. Endocrinology · 2012
    Review
  14. Article
  15. Article
  16. Article
  17. Association analysis of allelic variants of USF1 in coronary atherosclerosis.Arteriosclerosis, thrombosis, and vascular biology · 2008
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Hilary CoonNeurodevelopmental Genetics Project, Department of Psychiatry, University of Utah, Salt Lake City, UT 84108, USA. hilary@bach.med.utah.edu
Yuanpei Xin
Paul N Hopkins
Richard M Cawthon
Sandra J Hasstedt
Steven C Hunt
University of Utah · US

Funding

GENETIC EPIDEMIOLOGY OF AGING IN UTAH PEDIGREESR01AG018734 · NIA · UNIVERSITY OF UTAH · PI HUNT, STEVEN C. · 2000 to 2007
$7.5M
MODELS FOR THE GENETIC EPIDEMIOLOGY OF CHRONIC DISEASESR01HD017463 · NICHD · UNIVERSITY OF UTAH · PI HASSTEDT, SANDRA J · 1987 to 2009
$1.7M
CHARACTERIZATION OF CORONARY PRONE PEDIGREESR01HL021088 · NHLBI · UNIVERSITY OF UTAH · PI WILLIAMS, ROGER R · 1985 to 1990
–
GENETIC &ENVIRONMENTAL DETERMINANTS OF HYPERTENSIONR01HL024855 · NHLBI · UNIVERSITY OF UTAH · PI WILLIAMS, ROGER R · 1985 to 1991
–
URINARY KALLIKREIN &HYPERTENSION--PROSPECTIVE STUDYR01HL044738 · NHLBI · UNIVERSITY OF UTAH · PI HUNT, STEVEN C. · 1990 to 1992
–
GENETIC MODELS AND METHODOLOGY IN PEDIGREE ANALYSISR23HD017463 · NICHD · UNIVERSITY OF UTAH · PI HASSTEDT, SANDRA J · 1985 to 1985
–
NHLBI NIH HHS HL21088NHLBI NIH HHS HL24855NHLBI NIH HHS HL44738NIA NIH HHS AG18734NICHD NIH HHS HD17463
6 · The paper itself

Abstract

Positive evidence has been reported for linkage and association between the upstream stimulatory factor 1 gene (USF1) and familial combined hyperlipidemia (FCHL). We genotyped the two most positive single-nucleotide polymorphisms (SNPs) (usf1s1: rs3737787 and usf1s2: rs2073658) from previous studies in a large family sample. This sample included 2,195 subjects in 87 Utah pedigrees ascertained for early death due to coronary heart disease (CHD), early strokes, or early onset hypertension. There were a total of 262 relative pairs in these families with FCHL. In the full family sample, FCHL was associated with usf1s1 (P = 0.02). Triglyceride and LDL cholesterol defined qualitatively or quantitatively were also associated with usf1s1 (P = 0.02-0.05). Results were strengthened for qualitative and quantitative triglyceride and LDL cholesterol when data from males only was analyzed, revealing associations for usf1s1 (P = 0.001-0.02), usf1s2 (P = 0.02-0.05) and the haplotype of these two SNPs (P = 0.01-0.04). The strongest results were in the subset of subjects from families ascertained for premature stroke or hypertension, rather than those ascertained for premature CHD. This study replicates the involvement of USF1 in FCHL and related lipid traits in a family sample not ascertained for FCHL.

Indexed as

AgedAge of OnsetCholesterol, LDLCoronary Artery DiseaseDNA-Binding ProteinsFemaleGenotypeHumansHyperlipidemia, Familial CombinedHypertensionMaleMiddle AgedPedigreePhenotypePolymorphism, Single NucleotideStrokeCholesterol, LDLDNA-Binding ProteinsTranscription FactorsTriglyceridesUpstream Stimulatory FactorsUSF1 protein, human

Identifiers

PMID15959806
OpenAlexW2149650645

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.