Evidence map›Paper›PMID 15958186›Full record

ArticleAnalytical biochemistry2005

A continuous spectrophotometric assay for human cystathionine beta-synthase.

Weijun Shen, Molly K McGath, Ruby Evande, David B Berkowitz

Abstract readEvaluation Study
In one paragraph

Article in Analytical biochemistry, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact, top 90% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Cysteamine revisited: repair of arginine to cysteine mutations.Journal of inherited metabolic disease · 2017
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Weijun ShenDepartment of Chemistry, University of Nebraska, Lincoln, NE 68588, USA.
Molly K McGath
Ruby Evande
David B Berkowitz
University of Nebraska–Lincoln · US

Funding

NEW IRREVERSIBLE INHIBITORS FOR AMINO ACID DECARBOXYLASER29CA062034 · NCI · UNIVERSITY OF NEBRASKA LINCOLN · PI BERKOWITZ, DAVID B · 1995 to 1999
–
NCI NIH HHS R29 CA062034
6 · The paper itself

Abstract

We report a new continuous spectrophotometric assay for human cystathionine beta-synthase (hCBS). This assay relies upon the finding that hCBS will take cysteamine in place of L-homocysteine, thereby producing thialysine. Thialysine is, in turn, decarboxylated by lysine decarboxylase, releasing CO2 that is monitored by the sequential action of phosphoenolpyruvate carboxylase and L-malate dehydrogenase. The decrease in absorbance at 340 nm is monitored as reduced nicotinamide adenine dinucleotide is consumed. Using this four-enzyme couple, we find that Km(app) = 1.2+/-0.2 mM for L-serine and 5.6+/-2.2 mM for cysteamine, with kcat = 1.3+/-0.1s(-1) for the formation of thialysine by hCBS. For comparison purposes, the same hCBS reaction was monitored via a radioactive single time point assay using 14C-(C-1)-labeled L-serine and cysteamine as substrates, counting the thialysine product, following ion exchange chromatography. This assay yielded Km(app) = 2.2+/-0.5 mM for L-serine and 6.6+/-2.2 for cysteamine, with kcat = 2.5+/-0.4 s(-1). These numbers indicate that, although it possesses a shortened carbon chain and lacks a carboxyl group, cysteamine displays a catalytic efficiency (kcat/Km) with hCBS that is within an order of magnitude of that observed with its natural thiol cosubstrate, L-homocysteine.

Indexed as

Carboxy-LyasesCystathionine beta-SynthaseCysteamineCysteineHumansKineticsMalate DehydrogenasePhosphoenolpyruvate CarboxylaseSpectrophotometry, UltravioletCarboxy-LyasesCystathionine beta-SynthaseCysteamineCysteinelysine decarboxylaseMalate DehydrogenasePhosphoenolpyruvate CarboxylaseS-2-aminoethyl cysteine

Identifiers

PMID15958186
PMCPMC6064648
OpenAlexW2029112933

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.