Evidence map›Paper›PMID 15952068›Full record

ArticlePlant molecular biology2005

Arabidopsis Rad51B is important for double-strand DNA breaks repair in somatic cells.

Keishi Osakabe, Kiyomi Abe, Hiroaki Yamanouchi, Toshio Takyuu, Terutaka Yoshioka, Yuji Ito, Tomohiko Kato, Satoshi Tabata, Shunsuke Kurei, Yasushi Yoshioka and 6 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. DNA- and DNA-Protein-Crosslink Repair in Plants.International journal of molecular sciences · 2019
    Review
  7. Article
  8. DNA Repair GeneInternational journal of molecular sciences · 2019
    Article
  9. Article
  10. Article
  11. Homology-dependent repair is involved in 45S rDNA loss in plant CAF-1 mutants.The Plant journal : for cell and molecular biology · 2015
    Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Plant DNA recombinases: a long way to go.Journal of nucleic acids · 2010
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 1 country.

Keishi OsakabeDepartment of Plant Biotechnology, National Institute of Agrobiological Sciences, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8602, Japan.
Kiyomi Abe
Hiroaki Yamanouchi
Toshio Takyuu
Terutaka Yoshioka
Yuji Ito
Tomohiko Kato
Satoshi Tabata
Shunsuke Kurei
Yasushi Yoshioka
Yasunori Machida
Motoaki Seki
Masatomo Kobayashi
Kazuo Shinozaki
Hiroaki Ichikawa
Seiichi Toki
Hitachi (Japan) · JPInstitute of Agrobiological Sciences · JPNagoya University · JPKazusa DNA Research Institute · JPRIKEN Center for Integrative Medical Sciences · JPRIKEN BioResource Research Center · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rad51 paralogs belong to the Rad52 epistasis group of proteins and are involved in homologous recombination (HR), especially the assembly and stabilization of Rad51, which is a homolog of RecA in eukaryotes. We previously cloned and characterized two RAD51 paralogous genes in Arabidopsis, named AtRAD51C and AtXRCC3, which are considered the counterparts of human RAD51C and XRCC3, respectively. Here we describe the identification of RAD51B homologue in Arabidopsis, AtRAD51B. We found a higher expression of AtRAD51B in flower buds and roots. Expression of AtRAD51B was induced by genotoxic stresses such as ionizing irradiation and treatment with a cross-linking reagent, cisplatin. Yeast two-hybrid analysis showed that AtRad51B interacted with AtRad51C. We also found and characterized T-DNA insertion mutant lines. The mutant lines were devoid of AtRAD51B expression, viable and fertile. The mutants were moderately sensitive to gamma-ray and hypersensitive to cisplatin. Our results suggest that AtRAD51B gene product is involved in the repair of double-strand DNA breaks (DSBs) via HR.

Indexed as

DNA RepairAmino Acid SequenceArabidopsisArabidopsis ProteinsBase SequenceBlotting, NorthernCisplatinCloning, MolecularDNADNA, BacterialDNA, ComplementaryDNA DamageGamma RaysGene Expression ProfilingGene Expression Regulation, PlantMolecular Sequence DataArabidopsis ProteinsCisplatinDNADNA, BacterialDNA, ComplementaryProtein IsoformsRAD51B protein, ArabidopsisT-DNA

Identifiers

PMID15952068
OpenAlexW2028612056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.