Evidence map›Paper›PMID 15944345›Full record

ArticleGenetics2005

Cross-species comparison of Drosophila male accessory gland protein genes.

J L Mueller, K Ravi Ram, L A McGraw, M C Bloch Qazi, E D Siggia, A G Clark, C F Aquadro, M F Wolfner

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
25.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 173 citations in OpenAlex.

  1. Article
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  12. Nonadaptive molecular evolution of seminal fluid proteins in Drosophila.Evolution; international journal of organic evolution · 2021
    Article
  13. Article
  14. Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Satyrization in Drosophila fruitflies.Journal of evolutionary biology · 2021
    Article
  16. Article
  17. Article
  18. Transcriptome Analysis ofFrontiers in physiology · 2020
    Article
  19. Article
  20. Review

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

J L MuellerDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York 14853, USA.
K Ravi Ram
L A McGraw
M C Bloch Qazi
E D Siggia
A G Clark
C F Aquadro
M F Wolfner
Cornell University · USRockefeller University · US

Funding

ACTIONS OF SEMINAL PROTEINS IN MATED DROSOPHILA FEMALESR01HD038921 · NICHD · CORNELL UNIVERSITY ITHACA · PI WOLFNER, MARIANA FEDERICA · 2000 to 2019
$5.6M
PREDOCTORAL TRAINING IN GENETICS AND DEVELOPMENTT32GM007617 · NIGMS · CORNELL UNIVERSITY ITHACA · PI BARBASH, DANIEL A · 1985 to 2021
$5.5M
Actions of Seminal Proteins in Mated Drosophila FemalesR37HD038921 · NICHD · CORNELL UNIVERSITY · PI Mariana Federica Wolfner · 2020 to 2026
$2.7M
MOLECULAR POPULATION GENETICS OF DROSOPHILA MELANOGASTERR01GM036431 · NIGMS · CORNELL UNIVERSITY ITHACA · PI AQUADRO, CHARLES F · 1986 to 2010
$2.6M
NICHD NIH HHS HD38921NICHD NIH HHS R01 HD038921NICHD NIH HHS R37 HD038921NIGMS NIH HHS GM36431NIGMS NIH HHS R01 GM036431NIGMS NIH HHS T32 GM007617NIGMS NIH HHS T32 GM7617
6 · The paper itself

Abstract

Drosophila melanogaster males transfer seminal fluid proteins along with sperm during mating. Among these proteins, ACPs (Accessory gland proteins) from the male's accessory gland induce behavioral, physiological, and life span reduction in mated females and mediate sperm storage and utilization. A previous evolutionary EST screen in D. simulans identified partial cDNAs for 57 new candidate ACPs. Here we report the annotation and confirmation of the corresponding Acp genes in D. melanogaster. Of 57 new candidate Acp genes previously reported in D. melanogaster, 34 conform to our more stringent criteria for encoding putative male accessory gland extracellular proteins, thus bringing the total number of ACPs identified to 52 (34 plus 18 previously identified). This comprehensive set of Acp genes allows us to dissect the patterns of evolutionary change in a suite of proteins from a single male-specific reproductive tissue. We used sequence-based analysis to examine codon bias, gene duplications, and levels of divergence (via dN/dS values and ortholog detection) of the 52 D. melanogaster ACPs in D. simulans, D. yakuba, and D. pseudoobscura. We show that 58% of the 52 D. melanogaster Acp genes are detectable in D. pseudoobscura. Sequence comparisons of ACPs shared and not shared between D. melanogaster and D. pseudoobscura show that there are separate classes undergoing distinctly dissimilar evolutionary dynamics.

Indexed as

AnimalsChromosome MappingDrosophilaDrosophila melanogasterDrosophila ProteinsGenome, InsectMaleMolecular Sequence DataMultigene FamilySequence Analysis, DNASpecies SpecificityX ChromosomeDrosophila Proteins

Identifiers

PMID15944345
PMCPMC1456506
OpenAlexW2128638276

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.