Evidence map›Paper›PMID 15937178›Full record

ArticleJournal of bacteriology2005

Evolution of transcription regulatory genes is linked to niche specialization in the bacterial pathogen Streptococcus pyogenes.

Debra E Bessen, Anand Manoharan, Feng Luo, John E Wertz, D Ashley Robinson

Abstract read
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
14.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 84 citations in OpenAlex.

  1. Article
  2. Environmental Regulation of Toxin Production inbioRxiv : the preprint server for biology · 2025
    Article
  3. Frontiers in cellular and infection microbiology · 2025
    Article
  4. Article
  5. Article
  6. Pathogens (Basel, Switzerland) · 2021
    Review
  7. Review
  8. PRD-Containing Virulence Regulators (PCVRs) in Pathogenic Bacteria.Frontiers in cellular and infection microbiology · 2021
    Review
  9. Article
  10. Article
  11. Review
  12. Molecular epidemiology and genomics of group A Streptococcus.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2015
    Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Debra E BessenDepartment of Microbiology and Immunology, New York Medical College, Valhalla, New York 10595, USA. debra_bessen@nymc.edu
Anand Manoharan
Feng Luo
John E Wertz
D Ashley Robinson
New York Medical College · US

Funding

Tissue-Specific Infection by Group A StreptococciR01AI053826 · NIAID · NEW YORK MEDICAL COLLEGE · PI BESSEN, DEBRA E · 2003 to 2007
$1.3M
EVOLUTION OF GROUP A STREPTOCOCCIR01GM060793 · NIGMS · YALE UNIVERSITY · PI BESSEN, DEBRA E · 2000 to 2004
$1.1M
NIAID NIH HHS R01 AI053826NIAID NIH HHS R01-AI053826NIGMS NIH HHS GM060793NIGMS NIH HHS R01 GM060793
6 · The paper itself

Abstract

Streptococcus pyogenes is a highly prevalent bacterial pathogen, most often giving rise to superficial infections at the throat or skin of its human host. Three genotype-defined subpopulations of strains exhibiting strong tropisms for either the throat or skin (specialists) or having no obvious tissue site preference (generalists) are recognized. Since the microenvironments at the throat and skin are distinct, the signal transduction pathways leading to the control of gene expression may also differ for throat versus skin strains of S. pyogenes. Two loci (mga and rofA/nra) encoding global regulators of virulence gene expression are positioned 300 kb apart on the genome; each contains alleles forming two major sequence clusters of approximately 25 to 30% divergence that are under balancing selection. Strong linkage disequilibrium is observed between sequence clusters of the transcription regulatory loci and the subpopulations of throat and skin specialists, against a background of high recombination rates among housekeeping genes. A taxonomically distinct commensal species (Streptococcus dysgalactiae subspecies equisimilus) shares highly homologous rof alleles. The findings provide strong support for a mechanism underlying niche specialization that involves orthologous replacement of regulatory genes following interspecies horizontal transfer, although the directionality of gene exchange remains unknown.

Indexed as

Genes, RegulatorBacterial ProteinsBiological EvolutionGenetic LinkageGenetic VariationHumansMolecular Sequence DataPharynxPhylogenySelection, GeneticSignal TransductionSkinStreptococcus pyogenesTrans-ActivatorsTranscription FactorsTranscription, GeneticBacterial ProteinsNra protein, Streptococcus pyogenesrofA protein, StreptococcusTrans-ActivatorsTranscription Factors

Identifiers

PMID15937178
PMCPMC1151717
OpenAlexW2161806275

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.