ArticleGenetics2005
Linkage mapping of 1454 new maize candidate gene Loci.
Article in Genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.
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Who cites it
40 citing papers in PubMed, 1 synthesis or guideline pooled it.
- A common genetic determinism for sensitivities to soil water deficit and evaporative demand: meta-analysis of quantitative trait Loci and introgression lines of maize.Plant physiology · 2011Pooled it
- SeSAM: software for automatic construction of order-robust linkage maps.BMC bioinformatics · 2022Article
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- Genetic Correlations Between Photosynthetic and Yield Performance in Maize Are Different Under Two Heat Scenarios During Flowering.Frontiers in plant science · 2019Article
- General and specific combining abilities in a maize (Zea mays L.) test-cross hybrid panel: relative importance of population structure and genetic divergence between parents.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Genome-wide association study (GWAS) reveals the genetic architecture of four husk traits in maize.BMC genomics · 2016Article
- Analysis of recombination QTLs, segregation distortion, and epistasis for fitness in maize multiple populations using ultra-high-density markers.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2016Article
- SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population.BMC genomics · 2016Article
- An integrated genetic map based on four mapping populations and quantitative trait loci associated with economically important traits in watermelon (Citrullus lanatus).BMC plant biology · 2014Article
- Intraspecific variation of recombination rate in maize.Genome biology · 2013Article
- Development of pachytene FISH maps for six maize chromosomes and their integration with other maize maps for insights into genome structure variation.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2012Article
- Article
- Integration of gene-based markers in a pearl millet genetic map for identification of candidate genes underlying drought tolerance quantitative trait loci.BMC plant biology · 2012Article
- Article
- The ZmASR1 protein influences branched-chain amino acid biosynthesis and maintains kernel yield in maize under water-limited conditions.Plant physiology · 2011Article
- A consensus linkage map for molecular markers and quantitative trait loci associated with economically important traits in melon (Cucumis melo L.).BMC plant biology · 2011Article
- Effect of population structure corrections on the results of association mapping tests in complex maize diversity panels.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Contrasted patterns of selection since maize domestication on duplicated genes encoding a starch pathway enzyme.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2011Article
- Integration of linkage maps for the Amphidiploid Brassica napus and comparative mapping with Arabidopsis and Brassica rapa.BMC genomics · 2011Article
- Article
Corrections and comments
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Authors and funding
12 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Bioinformatic analyses of maize EST sequences have highlighted large numbers of candidate genes putatively involved in agriculturally important traits. To contribute to ongoing efforts toward mapping of these genes, we used two populations of intermated recombinant inbred lines (IRILs), which allow a higher map resolution than nonintermated RILs. The first panel (IBM), derived from B73 x Mo17, is publicly available from the Maize Genetics Cooperation Stock Center. The second panel (LHRF) was developed from F2 x F252 to map loci monomorphic on IBM. We built framework maps of 237 loci from the IBM panel and 271 loci from the LHRF panel. Both maps were used to place 1454 loci (1056 on map IBM_Gnp2004 and 398 on map LHRF_Gnp2004) that corresponded to 954 cDNA probes previously unmapped. RFLP was mostly used, but PCR-based methods were also performed for some cDNAs to map SNPs. Unlike in usual IRIL-based maps published so far, corrected meiotic centimorgan distances were calculated, taking into account the number of intermating generations undergone by the IRILs. The corrected sizes of our framework maps were 1825 cM for IBM_Gnp2004 and 1862 cM for LHRF_Gnp2004. All loci mapped on LHRF_Gnp2004 were also projected on a consensus map IBMconsensus_Gnp2004. cDNA loci formed clusters near the centromeres except for chromosomes 1 and 8.
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