Evidence map›Paper›PMID 15918904›Full record

ArticleMolecular cancer2005

A transcriptome map of cellular transformation by the fos oncogene.

Jared M Ordway, Steven D Fenster, Hong Ruan, Thomas Curran

Abstract read
In one paragraph

Article in Molecular cancer, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jared M OrdwayOrion Genomics, 4041 Forest Park Ave., St. Louis, MO 63108, USA. jordway@oriongenomics.com
Steven D Fenster
Hong Ruan
Thomas Curran

Funding

STUDIES OF THE FOS ONCOGENER01CA084139 · NCI · ST. JUDE CHILDREN'S RESEARCH HOSPITAL · PI CURRAN, TOM · 2000 to 2004
$2.0M
NCI NIH HHS R01 CA084139NCI NIH HHS R01 CA 84139
6 · The paper itself

Abstract

backgroundThe c-fos gene was originally identified as the cellular homolog of the oncogene v-fos carried by the Finkel-Biskis-Jenkins and Finkel-Biskis-Reilly murine osteogenic sarcoma retroviruses. Sustained expression of fos is sufficient to induce cellular transformation in vitro and tumorigenesis in vivo. Fos functions as a component of the AP-1 transcription factor complex to regulate gene transcription and several differentially expressed genes have been identified in cells transformed by fos. We have extended these studies by constructing a cellular system for conditional transformation by v-fos. Using Affymetrix-based DNA microarray technology, we analyzed transcriptional changes over the course of transformation and reversion in an inducible v-fos system.

resultsMicroarray analyses of temporal gene expression during the process of v-fos mediated cellular transformation and morphological reversion revealed a remarkably dynamic transcriptome. Of the more than 8000 genes analyzed in this study, 3766 genes were categorized into 18 gene-expression patterns by using self-organizing map analysis. By combining the analysis of gene expression profiles in stably transformed cells with the analysis of sequential expression patterns during conditional transformation, we identified a relatively small cohort of genes implicated in v-fos mediated cellular transformation.

conclusionThis approach defines a general conditional cell transformation system that can be used to study the endogenous transcription regulatory mechanisms involved in transformation and tumorigenesis. In addition, this study is the first reported analysis of dynamic changes in gene expression throughout experimentally controlled morphological transformation mediated by v-fos.

Indexed as

Gene Expression ProfilingOligonucleotide Array Sequence AnalysisCell LineCell ShapeCell Transformation, NeoplasticDatabases, GeneticGene Expression Regulation, NeoplasticLac OperonOncogene Proteins v-fosTranscription, GeneticOncogene Proteins v-fos

Identifiers

PMID15918904
PMCPMC1177986

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.