Evidence map›Paper›PMID 15918009›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2005

Quantitative trait loci for partial resistance to crown rust, Puccinia coronata, in cultivated oat, Avena sativa L.

V A Portyanko, G Chen, H W Rines, R L Phillips, K J Leonard, G E Ochocki, D D Stuthman

Erratum issuedAbstract readComparative Study
PubMed Publisher
In one paragraph

Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 71 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. OMICS in Fodder Crops: Applications, Challenges, and Prospects.Current issues in molecular biology · 2022
    Review
  7. Breeding oat for resistance to the crown rust pathogen Puccinia coronata f. sp. avenae: achievements and prospects.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Genetic analysis and molecular mapping of a seedling crown rust resistance gene in oat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Identification of RFLP and NBS/PK profiling markers for disease resistance loci in genetic maps of oats.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2013
    Article
  20. Comparative analysis of multiple disease resistance in ryegrass and cereal crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2008
    Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

V A PortyankoDepartment of Plant Biology, University of Minnesota, St. Paul, 55108, USA.
G Chen
H W Rines
R L Phillips
K J Leonard
G E Ochocki
D D Stuthman
University of Minnesota · USAgricultural Research Service · USAgriculture and Agri-Food Canada · CACereal Disease Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To facilitate the detection of quantitative trait loci (QTLs) for partial resistance to oat crown rust, Puccinia coronata f. sp. avenae Eriks., a genetic map was generated in a population of 158 F(6)-derived oat recombinant inbred lines from a cross of a partial resistance line MN841801-1 by a susceptible cultivar selection 'Noble-2'. The map, developed using 230 marker loci, mostly restriction fragment length polymorphism and amplified fragment length polymorphism markers, spanned 1,509 cM (Haldane) arranged into 30 linkage groups of 2-18 markers each. Four consistently detected major QTLs for partial rust resistance, Prq1a, Prq1b, Prq2, and Prq7, and three minor QTLs, Prq3, Prq5, and Prq6, were found in tests involving three field and two greenhouse environments. In addition, two major QTLs for flowering time, Ftq1 and Ftq7, and five weaker QTLs, Ftq2, Ftq3, Ftq4, Ftq5, and Ftq6, were revealed. Overlapping of the map segments of Ftq1 and Prq1 and of Ftq7 and Prq7 suggested either linkage between the flowering time QTLs and resistance QTLs or a pleiotropic effect of the Ftq QTLs on rust resistance. Relatively low heritability estimates (0.30) obtained for partial resistance to crown rust in the field indicate a potential value for marker-assisted selection.

Indexed as

BasidiomycotaChromosome MappingQuantitative Trait LociAvenaCrosses, GeneticFlowersImmunity, InnateNucleic Acid Amplification TechniquesPlant DiseasesPolymorphism, Restriction Fragment Length

Identifiers

PMID15918009
OpenAlexW2060459406

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.