Evidence map›Paper›PMID 15914671›Full record

ArticleNucleic acids research2005

Human XPC-hHR23B interacts with XPA-RPA in the recognition of triplex-directed psoralen DNA interstrand crosslinks.

Brian S Thoma, Mitsuo Wakasugi, Jesper Christensen, Madhava C Reddy, Karen M Vasquez

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 68 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Review
  6. Review
  7. Review
  8. Article
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  13. Review
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  15. Article
  16. Article
  17. A human XPC protein interactome--a resource.International journal of molecular sciences · 2013
    Article
  18. Review
  19. Article
  20. Inhibition of transcription by platinated triplex-forming oligonucleotides.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2012
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brian S ThomaDepartment of Carcinogenesis, The University of Texas M. D. Anderson Cancer Center, Science Park-Research Division Smithville, TX 78957, USA.
Mitsuo Wakasugi
Jesper Christensen
Madhava C Reddy
Karen M Vasquez
The University of Texas MD Anderson Cancer Center · US

Funding

Recognition and processing of complex lesions by components from multiple DNAP01CA097175 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI NAIRN, RODNEY S · 2004 to 2014
$15.3M
REPAIR OF GENOME DESTABILIZING DNA STRUCTURESR01CA093729 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Karen M Vasquez · 2002 to 2026
$8.2M
RESEARCH TRAINING IN CARCINOGENESIS &MUTAGENESIST32CA009480 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RICHIE, ELLEN R · 1985 to 2012
$3.0M
NCI NIH HHS CA09480NCI NIH HHS CA93729NCI NIH HHS CA97175NCI NIH HHS P01 CA097175NCI NIH HHS R01 CA093729NCI NIH HHS T32 CA009480
6 · The paper itself

Abstract

DNA interstrand crosslinks (ICLs) represent a severe form of damage that blocks DNA metabolic processes and can lead to cell death or carcinogenesis. The repair of DNA ICLs in mammals is not well characterized. We have reported previously that a key protein complex of nucleotide excision repair (NER), XPA-RPA, recognizes DNA ICLs. We now report the use of triplex technology to direct a site-specific psoralen ICL to a target DNA substrate to determine whether the human global genome NER damage recognition complex, XPC-hHR23B, recognizes this lesion. Our results demonstrate that XPC-hHR23B recognizes psoralen ICLs, which have a structure fundamentally different from other lesions that XPC-hHR23B is known to bind, with high affinity and specificity. XPC-hHR23B and XPA-RPA protein complexes were also observed to bind psoralen ICLs simultaneously, demonstrating not only that psoralen ICLs are recognized by XPC-hHR23B alone, but also that XPA-RPA may interact cooperatively with XPC-hHR23B on damaged DNA, forming a multimeric complex. Since XPC-hHR23B and XPA-RPA participate in the recognition and verification of DNA damage, these results support the hypothesis that interplay between components of the global genome repair sub-pathway of NER is critical for the recognition of psoralen DNA ICLs in the mammalian genome.

Indexed as

DNA DamageDNA RepairCross-Linking ReagentsDNADNA-Binding ProteinsDNA Repair EnzymesFicusinHumansKineticsProtein BindingReplication Protein AXeroderma Pigmentosum Group A ProteinCross-Linking ReagentsDNADNA-Binding ProteinsDNA Repair EnzymesFicusinRAD23A protein, humanRAD23B protein, humanReplication Protein ARPA1 protein, humantriplex DNAXeroderma Pigmentosum Group A ProteinXPA protein, humanXPC protein, human

Identifiers

PMID15914671
PMCPMC1140082
OpenAlexW2150797448

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.