Evidence map›Paper›PMID 15909225›Full record

ArticleJournal of molecular evolution2005

Type I polyketide synthases may have evolved through horizontal gene transfer.

Aurélien Ginolhac, Cyrille Jarrin, Patrick Robe, Guy Perrière, Timothy M Vogel, Pascal Simonet, Renaud Nalin

Abstract read
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In one paragraph

Article in Journal of molecular evolution, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 85 citations in OpenAlex.

  1. Review
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  5. Genome Mining ofMolecules (Basel, Switzerland) · 2021
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  11. Emerging evolutionary paradigms in antibiotic discovery.Journal of industrial microbiology & biotechnology · 2019
    Review
  12. Article
  13. Review
  14. Article
  15. Structural and evolutionary relationships of "AT-less" type I polyketide synthase ketosynthases.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  16. Article
  17. Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Aurélien GinolhacLibraGen S.A., Bâtiment Canal Biotech 1, 3 rue des Satellites, 31400, Toulouse, France. contact@libragen.com
Cyrille Jarrin
Patrick Robe
Guy Perrière
Timothy M Vogel
Pascal Simonet
Renaud Nalin
Centre National de la Recherche Scientifique · FRParis Biotech Santé · FRUniversité Claude Bernard Lyon 1 · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Type I polyketide synthases (PKSI) are modular multidomain enzymes involved in the biosynthesis of many natural products of industrial interest. PKSI modules are minimally organized in three domains: ketosynthase (KS), acyltransferase (AT), and acyl carrier protein. The KS domain phylogeny of 23 PKSI clusters was determined. The results obtained suggest that many horizontal transfers of PKSI genes have occurred between actinomycetales species. Such gene transfers may explain the homogeneity and the robustness of the actinomycetales group since gene transfers between closely related species could mimic patterns generated by vertical inheritance. We suggest that the linearity and instability of actinomycetales chromosomes associated with their large quantity of genetic mobile elements have favored such horizontal gene transfers.

Indexed as

Evolution, MolecularGene Transfer, HorizontalGene Transfer TechniquesAcyltransferasesAmphotericin BBacterial ProteinsGenes, BacterialMacrolidesModels, GeneticMultigene FamilyNatamycinNystatinPhylogenyPolyketide SynthasesProtein Structure, TertiaryAcyltransferasesAmphotericin BBacterial ProteinsMacrolidesNatamycinNystatinPolyketide Synthasessoraphen A

Identifiers

PMID15909225
OpenAlexW1998251886

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.