Evidence map›Paper›PMID 15906147›Full record

ArticleJournal of bioenergetics and biomembranes2005

Rapid nonsynonymous evolution of the iron-sulfur protein in anthropoid primates.

Jeffrey W Doan, Timothy R Schmidt, Derek E Wildman, Morris Goodman, Mark L Weiss, Lawrence I Grossman

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Journal of bioenergetics and biomembranes, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Evolution of the couple cytochrome c and cytochrome c oxidase in primates.Advances in experimental medicine and biology · 2012
    Review
  4. Article
  5. Conservation and evolution of gene coexpression networks in human and chimpanzee brains.Proceedings of the National Academy of Sciences of the United States of America · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jeffrey W DoanCenter for Molecular Medicine and Genetics, Wayne State University School of Medicine, 540 E. Canfield Avenue, Detroit, MI 48201, USA.
Timothy R Schmidt
Derek E Wildman
Morris Goodman
Mark L Weiss
Lawrence I Grossman
Wayne State University · USU.S. National Science Foundation · US

Funding

Mitochondrial-nuclear gene co-evolution and adaptationR24GM065580 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI STEWART, CARO-BETH R. · 2002 to 2005
$1.5M
NIGMS NIH HHS GM 65580
6 · The paper itself

Abstract

Cytochrome c (CYC) and 9 of the 13 subunits of cytochrome c oxidase (complex IV; COX) were previously shown to have accelerated rates of nonsynonymous substitution in anthropoid primates. Cytochrome b, the mtDNA encoded subunit of ubiquinol-cytochrome c reductase (complex III), also showed an accelerated nonsynonymous substitution rate in anthropoid primates but rate information about the nuclear encoded subunits of complex III has been lacking. We now report that phylogenetic and relative rates analysis of a nuclear encoded catalytically active subunit of complex III, the iron-sulfur protein (ISP), shows an accelerated rate of amino acid replacement similar to cytochrome b. Because both ISP and subunit 9, whose function is not directly related to electron transport, are produced by cleavage into two subunits of the initial translation product of a single gene, it is probable that these two subunits of complex III have essentially identical underlying rates of mutation. Nevertheless, we find that the catalytically active ISP has an accelerated rate of amino acid replacement in anthropoid primates whereas the catalytically inactive subunit 9 does not.

Indexed as

Evolution, MolecularAmino Acid SequenceAmino Acid SubstitutionAnimalsHumansIron-Sulfur ProteinsLemurLiverPhylogenyPrimatesSpecies SpecificityIron-Sulfur Proteins

Identifiers

PMID15906147
OpenAlexW2001023991

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.