Evidence map›Paper›PMID 15905975›Full record

ArticleJournal of molecular medicine (Berlin, Germany)2005

Highly conserved beta16/beta17 beta-hairpin structure in human immunodeficiency virus type 1 YU2 gp120 is critical for CCR5 binding.

Alain Mechulam, Martine Cerutti, Martine Pugnière, Dorothée Missé, Johanna Gajardo, Françoise Roquet, James Robinson, Francisco Veas

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Article in Journal of molecular medicine (Berlin, Germany), 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alain MechulamLaboratoire d'Immunologie Rétrovirale et Moléculaire, Institut Français de Recherches pour le Développement (IRD), UR 034, 240 Av. Emile Jeanbrau, Etablissement Français du Sang, 34094, Montpellier, France.
Martine Cerutti
Martine Pugnière
Dorothée Missé
Johanna Gajardo
Françoise Roquet
James Robinson
Francisco Veas

Funding

MONOCLONAL ANTIBODIES TO HIV-1 GP 120R01AI024030 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI ROBINSON, JAMES E · 1987 to 2005
$1.5M
NIAID NIH HHS AI24030
6 · The paper itself

Abstract

Whereas gp120 CD4-induced structures have been largely documented and at least in part elucidated by crystallization, information about gp120 coreceptor-induced structures remains incomplete despite numerous studies. In this work, mutations were carried out in a selected internal region of HIV-1/YU2 gp120, proximal to the CD4-binding site, because of its highly conserved nature among retroviruses and its high structural stability. The targeted residues, belonging to the beta16/beta17 beta-hairpin, modulate gp120 binding to CD4 and gp120-CD4 complex binding to CCR5. Thus, it appears that this gp120 structure acts as a hinge between the CD4-binding site and the putative coreceptor binding structure. Substitution of amino acid residues like E381A did not affect gp120 binding to CD4 and did not induce significant structural changes in gp120, as demonstrated by epitope analysis, BIACORE analysis, and circular dichroism. Nevertheless, E381 has a critical influence on the maintenance of CCR5 coreceptor binding by forming a salt bridge with K207. Another important element of the beta-hairpin in this interaction is the probable hydrophobic link between F383 and I420. Altogether, these results suggest that the beta-hairpin structure likely governs interactions between the surface of gp120 with native CCR5 or the CCR5 amino-terminal domain (CCR5-Nt). The mutations within the beta-hairpin had a direct effect on the proximal surface of the bridging sheet, the putative CCR5 surface, and the gp120 YU2 HIV-1-CD4 binding site. These results on the gp120-CCR5-Nt binding mechanism contribute to our understanding of CCR5 and HIV-1 gp120 association and HIV-1 entry; they may also contribute to designing novel inhibitors.

Indexed as

Amino Acid SequenceAntibodies, MonoclonalCD4 AntigensCircular DichroismFlow CytometryHIV-1HIV Envelope Protein gp120HumansMolecular Sequence DataMutagenesis, Site-DirectedProtein BindingProtein Structure, SecondaryReceptors, CCR5Sequence HomologyAntibodies, MonoclonalCD4 AntigensHIV Envelope Protein gp120Receptors, CCR5

Identifiers

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.