Evidence map›Paper›PMID 15905406›Full record

ArticleGenes & development2005

Zebrafish hairy/enhancer of split protein links FGF signaling to cyclic gene expression in the periodic segmentation of somites.

Akinori Kawamura, Sumito Koshida, Hiroko Hijikata, Takuya Sakaguchi, Hisato Kondoh, Shinji Takada

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 101 citations in OpenAlex.

  1. Evolvability in vertebrate segmentation.Seminars in cell & developmental biology · 2025
    Review
  2. Temporal and Spatial Variations in ZebrafishInternational journal of molecular sciences · 2024
    Article
  3. Cellular and molecular control of vertebrate somitogenesis.Nature reviews. Molecular cell biology · 2024
    Review
  4. Oscillatory control of embryonic development.Development (Cambridge, England) · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Frontiers in cell and developmental biology · 2021
    Review
  10. Genes · 2020
    Article
  11. Article
  12. Article
  13. Delta-Notch signalling in segmentation.Arthropod structure & development · 2017
    Review
  14. Signalling dynamics in vertebrate segmentation.Nature reviews. Molecular cell biology · 2014
    Review
  15. Article
  16. Article
  17. Article
  18. The synchrony and cyclicity of developmental events.Cold Spring Harbor perspectives in biology · 2012
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Akinori KawamuraOkazaki Institute for Integrative Biosciences, National Institutes of Natural Sciences, Okazaki, Aichi 444-8787, Japan.
Sumito Koshida
Hiroko Hijikata
Takuya Sakaguchi
Hisato Kondoh
Shinji Takada
Okazaki Institute for Integrative Bioscience · JPJapan Science and Technology Agency · JPNational Institutes of Natural Sciences · JPOsaka University · JPThe Graduate University for Advanced Studies, SOKENDAI · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Notch and fibroblast growth factor (FGF) signaling pathways have been implicated in the establishment of proper periodicity of vertebrate somites. Here, we show evidence that a Hes6-related hairy/Enhancer of split-related gene, her13.2, links FGF signaling to the Notch-regulated oscillation machinery in zebrafish. Expression of her13.2 is induced by FGF-soaked beads and decreased by an FGF signaling inhibitor. her13.2 is required for periodic repression of the Notch-regulated genes her1 and her7, and for proper somite segmentation. Furthermore, Her13.2 augments autorepression of her1 in association with Her1 protein. Therefore, FGF signaling appears to maintain the oscillation machinery by supplying a binding partner, Her13.2, for Her1.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsBody PatterningFibroblast Growth FactorsGene Expression Regulation, DevelopmentalRepressor ProteinsSignal TransductionSomitesTranscription FactorsZebrafishZebrafish ProteinsBasic Helix-Loop-Helix ProteinsFibroblast Growth Factorsher1 protein, zebrafishHER7 protein, zebrafishHes6 protein, zebrafishRepressor ProteinsTranscription FactorsZebrafish Proteins

Identifiers

PMID15905406
PMCPMC1132002
OpenAlexW2163585496

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.