Evidence map›Paper›PMID 15901700›Full record

ArticleJournal of bacteriology2005

Sulfur amino acid metabolism and its control in Lactococcus lactis IL1403.

Brice Sperandio, Patrice Polard, Dusko S Ehrlich, Pierre Renault, Eric Guédon

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
8.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
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  4. The Indigenous ProbioticAnimals : an open access journal from MDPI · 2024
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  5. Review
  6. CysB Is a Key Regulator of the Antifungal Activity ofInternational journal of molecular sciences · 2023
    Article
  7. Deep longitudinal multi-omics analysis ofFrontiers in microbiology · 2023
    Article
  8. Article
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  10. Development ofFrontiers in microbiology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Brice SperandioGénétique Microbienne, Institut National de la Recherche Agronomique, 78352 Jouy-en-Josas cedex, France.
Patrice Polard
Dusko S Ehrlich
Pierre Renault
Eric Guédon
Département Génétique Animale · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cysteine and methionine availability influences many processes in the cell. In bacteria, transcription of the specific genes involved in the synthesis of these two amino acids is usually regulated by different mechanisms or regulators. Pathways for the synthesis of cysteine and methionine and their interconversion were experimentally determined for Lactococcus lactis, a lactic acid bacterium commonly found in food. A new gene, yhcE, was shown to be involved in methionine recycling to cysteine. Surprisingly, 18 genes, representing almost all genes of these pathways, are under the control of a LysR-type activator, FhuR, also named CmbR. DNA microarray experiments showed that FhuR targets are restricted to this set of 18 genes clustered in seven transcriptional units, while cysteine starvation modifies the transcription level of several other genes potentially involved in oxidoreduction processes. Purified FhuR binds a 13-bp box centered 46 to 53 bp upstream of the transcriptional starts from the seven regulated promoters, while a second box with the same consensus is present upstream of the first binding box, separated by 8 to 10 bp. O-Acetyl serine increases FhuR binding affinity to its binding boxes. The overall view of sulfur amino acid metabolism and its regulation in L. lactis indicates that CysE could be a master enzyme controlling the activity of FhuR by providing its effector, while other controls at the enzymatic level appear to be necessary to compensate the absence of differential regulation of the genes involved in the interconversion of methionine and cysteine and other biosynthesis genes.

Indexed as

Amino AcidsBacterial ProteinsBase SequenceCysteineDNA-Binding ProteinsGene Expression Regulation, BacterialLactococcus lactisMolecular Sequence DataOligonucleotide Array Sequence AnalysisPromoter Regions, GeneticReverse Transcriptase Polymerase Chain ReactionSulfurTranscription FactorsAmino AcidsBacterial ProteinsCmbR protein, Lactococcus lactisCysteineDNA-Binding ProteinsSulfurTranscription Factors

Identifiers

PMID15901700
PMCPMC1112055
OpenAlexW2125116820

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.