Evidence map›Paper›PMID 15900493›Full record

ArticleImmunogenetics2005

TRAV gene usage in pig T-cell receptor alpha cDNA.

Ryuji Yamamoto, Hirohide Uenishi, Hiromi Hatsuse, Eimei Sato, Takashi Awata, Hiroshi Yasue, Yohtaroh Takagaki

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Ryuji YamamotoGenome Research Department, National Institute of Agrobiological Sciences, 2 Ikenodai, Tsukuba, 305-8602, Japan.
Hirohide Uenishi
Hiromi Hatsuse
Eimei Sato
Takashi Awata
Hiroshi Yasue
Yohtaroh Takagaki
Institute of Agrobiological Sciences · JPKitasato University · JPTohoku University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pig (Sus scrofa) TRA clones were isolated from cDNA libraries of total RNA from two different sources, the thymus of a 1-month-old LW strain pig and the peripheral blood lymphocytes of a 5-month-old Clawn strain pig. Among 103 complete TRA cDNA clones from both sources, 33 different TRAV genes were identified. By comparing their sequence identities against one another, these pig TRAV genes were grouped into 20 subgroups, including 13 subgroups, each containing only a single member. All of these pig subgroups gave corresponding human and mouse functional counterparts, suggesting their functional commonality. An exception was the Va01 gene segment, which lacked a functional human counterpart. The present report provides groundwork for studies on pig TRA expression.

Indexed as

Amino Acid SequenceAnimalsBase SequenceCloning, MolecularDNA, ComplementaryFemaleGene LibraryGenetic VariationHumansIn Vitro TechniquesMaleMiceMolecular Sequence DataPhylogenyReceptors, Antigen, T-Cell, alpha-betaSequence Homology, Amino AcidDNA, ComplementaryReceptors, Antigen, T-Cell, alpha-beta

Identifiers

PMID15900493
OpenAlexW2007728729

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.