Evidence map›Paper›PMID 15899859›Full record

ArticleMolecular and cellular biology2005

In vivo HP1 targeting causes large-scale chromatin condensation and enhanced histone lysine methylation.

Pernette J Verschure, Ineke van der Kraan, Wim de Leeuw, Johan van der Vlag, Anne E Carpenter, Andrew S Belmont, Roel van Driel

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 189 citations in OpenAlex.

  1. Review
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  12. TGM2-mediated histone transglutamination is dictated by steric accessibility.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  13. Review
  14. Article
  15. Article
  16. Nuclear AIM2-Like Receptors Drive Genotoxic Tissue Injury by Inhibiting DNA Repair.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2021
    Article
  17. Article
  18. Article
  19. Review
  20. Review

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Pernette J VerschureSwammerdam Institute for Life Sciences, BioCentrum Amsterdam, University of Amsterdam, P.O. Box 94062, 1090 GB Amsterdam, The Netherlands. pj.verschure@science.uva.nl
Ineke van der Kraan
Wim de Leeuw
Johan van der Vlag
Anne E Carpenter
Andrew S Belmont
Roel van Driel
University of Amsterdam · NLUniversity of Illinois Urbana-Champaign · USCentrum Wiskunde & Informatica · NLRadboud University Nijmegen · NL

Funding

LARGE SCALE CHROMATIN STRUCTURE/FUNCTIONR01GM042516 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI BELMONT, ANDREW STEVEN · 1995 to 2007
$1.9M
NIGMS NIH HHS R01 GM042516
6 · The paper itself

Abstract

Changes in chromatin structure are a key aspect in the epigenetic regulation of gene expression. We have used a lac operator array system to visualize by light microscopy the effect of heterochromatin protein 1 (HP1) alpha (HP1alpha) and HP1beta on large-scale chromatin structure in living mammalian cells. The structure of HP1, containing a chromodomain, a chromoshadow domain, and a hinge domain, allows it to bind to a variety of proteins. In vivo targeting of an enhanced green fluorescent protein-tagged HP1-lac repressor fusion to a lac operator-containing, gene-amplified chromosome region causes local condensation of the higher-order chromatin structure, recruitment of the histone methyltransferase SETDB1, and enhanced trimethylation of histone H3 lysine 9. Polycomb group proteins of both the HPC/HPH and the EED/EZH2 complexes, which are involved in the heritable repression of gene activity, are not recruited to the amplified chromosome region by HP1alpha and HP1beta in vivo targeting. HP1alpha targeting causes the recruitment of endogenous HP1beta to the chromatin region and vice versa, indicating a direct interaction between the two HP1 homologous proteins. Our findings indicate that HP1alpha and HP1beta targeting is sufficient to induce heterochromatin formation.

Indexed as

Gene SilencingCells, CulturedChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneChromosomes, HumanGreen Fluorescent ProteinsHeterochromatinHistone-Lysine N-MethyltransferaseHistonesHumansLysineMethylationOperator Regions, GeneticProtein MethyltransferasesRecombinant Fusion ProteinsRepressor ProteinsCBX1 protein, humanCBX5 protein, humanChromobox Protein Homolog 5Chromosomal Proteins, Non-Histoneenhanced green fluorescent proteinGreen Fluorescent ProteinsHeterochromatinHistone-Lysine N-MethyltransferaseHistonesLysineProtein MethyltransferasesRecombinant Fusion ProteinsRepressor ProteinsSETDB1 protein, human

Identifiers

PMID15899859
PMCPMC1140641
OpenAlexW2154071588

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.