Evidence map›Paper›PMID 15899857›Full record

ArticleMolecular and cellular biology2005

Endoplasmic reticulum stress induction of the Grp78/BiP promoter: activating mechanisms mediated by YY1 and its interactive chromatin modifiers.

Peter Baumeister, Shengzhan Luo, William C Skarnes, Guangchao Sui, Edward Seto, Yang Shi, Amy S Lee

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed, 1 pooled it
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed, 1 synthesis or guideline pooled it, 221 citations in OpenAlex.

  1. Pooled it
  2. Review
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  5. Article
  6. Article
  7. Stress-induced translocation of the endoplasmic reticulum chaperone GRP78/BiP and its impact on human disease and therapy.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  15. The Upstream 1350~1250 Nucleotide Sequences of the HumanInternational journal of molecular sciences · 2023
    Article
  16. Article
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  18. Review
  19. Review
  20. Article

52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Peter BaumeisterDepartment of Biochemistry and Molecular Biology, USC/Norris Comprehensive Cancer Center, Keck School of Medicine, 1441 Eastlake Ave., Room 5308, MC-9176, Los Angeles, CA 90089-9176, USA.
Shengzhan Luo
William C Skarnes
Guangchao Sui
Edward Seto
Yang Shi
Amy S Lee
USC Norris Comprehensive Cancer Center · USHarvard University · USUniversity of South Florida · USWellcome Sanger Institute · GB

Funding

STRESS INDUCTION OF THE GLUCOSE REGULATED PROTEINSR01CA027607 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LEE, AMY S · 1985 to 2021
$11.1M
TRANSCRIPTIONAL REPRESSION AND ACTIVATION BY YY1R01GM053874 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI SHI, YANG · 1996 to 2010
$4.6M
FUNCTIONAL ANALYSIS OF MAMMALIAN HISTONE DEACETYLASESR01GM058486 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI SETO, EDWARD · 1999 to 2006
$2.3M
Mechanisms of Transcription Factor Yin Yang 1R01GM064850 · NIGMS · UNIVERSITY OF SOUTH FLORIDA · PI SETO, EDWARD · 2002 to 2005
$1.0M
COORDINATED GENE EXPRESSION IN MAMMALIAN CELLSR37CA027607 · NCI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LEE, AMY S · 1988 to 1995
–
NCI NIH HHS CA 27607NCI NIH HHS R01 CA027607NIGMS NIH HHS GM 53874NIGMS NIH HHS GM 58486NIGMS NIH HHS GM 64850NIGMS NIH HHS R01 GM053874NIGMS NIH HHS R01 GM058486NIGMS NIH HHS R01 GM064850
6 · The paper itself

Abstract

The unfolded protein response is an evolutionarily conserved mechanism whereby cells respond to stress conditions that target the endoplasmic reticulum (ER). The transcriptional activation of the promoter of GRP78/BiP, a prosurvival ER chaperone, has been used extensively as an indicator of the onset of the UPR. YY1, a constitutively expressed multifunctional transcription factor, activates the Grp78 promoter only under ER stress conditions. Previously, in vivo footprinting analysis revealed that the YY1 binding site of the ER stress response element of the Grp78 promoter exhibits ER stress-induced changes in occupancy. Toward understanding the underlying mechanisms of these unique phenomena, we performed chromatin immunoprecipitation analyses, revealing that YY1 only occupies the Grp78 promoter upon ER stress and is mediated in part by the nuclear form of ATF6. We show that YY1 is an essential coactivator of ATF6 and uncover their specific interactive domains. Using small interfering RNA against YY1 and insertional mutation of the gene encoding ATF6alpha, we provide direct evidence that YY1 and ATF6 are required for optimal stress induction of Grp78. We also discovered enhancement of the ER-stressed induction of the Grp78 promoter through the interaction of YY1 with the arginine methyltransferase PRMT1 and evidence of its action through methylation of the arginine 3 residue on histone H4. Furthermore, we detected ER stress-induced binding of the histone acetyltransferase p300 to the Grp78 promoter and histone H4 acetylation. A model for the ER stress-mediated transcription factor binding and chromatin modifications at the Grp78 promoter leading to its activation is proposed.

Indexed as

AcetyltransferasesActivating Transcription Factor 6Amino Acid SequenceAnimalsCell Cycle ProteinsCell LineChromatinChromatin ImmunoprecipitationDNA-Binding ProteinsEndoplasmic ReticulumEndoplasmic Reticulum Chaperone BiPEnzyme InhibitorsErythroid-Specific DNA-Binding FactorsHeat-Shock ProteinsHistone AcetyltransferasesHumansAcetyltransferasesActivating Transcription Factor 6ATF6 protein, humanAtf6 protein, mouseCell Cycle ProteinsChromatinDNA-Binding ProteinsEndoplasmic Reticulum Chaperone BiPEnzyme InhibitorsErythroid-Specific DNA-Binding FactorsHeat-Shock ProteinsHistone AcetyltransferasesHSPA5 protein, humanHspa5 protein, mouseMolecular Chaperonesp300-CBP-Associated Factorp300-CBP Transcription FactorsProtein-Arginine N-MethyltransferasesRNA, Small InterferingThapsigarginTranscription FactorsYY1 protein, humanYy1 protein, mouseYY1 Transcription Factor

Identifiers

PMID15899857
PMCPMC1140640
OpenAlexW2113481120

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.