Evidence map›Paper›PMID 15890942›Full record

ArticleJournal of virology2005

5'-Terminal deletions occur in coxsackievirus B3 during replication in murine hearts and cardiac myocyte cultures and correlate with encapsidation of negative-strand viral RNA.

K-S Kim, S Tracy, W Tapprich, J Bailey, C-K Lee, K Kim, W H Barry, N M Chapman

Abstract read
In one paragraph

Article in Journal of virology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 148 citations in OpenAlex.

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  11. Three Modes of Viral Adaption by the Heart.bioRxiv : the preprint server for biology · 2024
    Article
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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

K-S KimEnterovirus Research Laboratory, Department of Pathology and Microbiology, University of Nebraska Medical Center, 986495 Nebraska Medical Center, Omaha, NE 68198-6495, USA.
S Tracy
W Tapprich
J Bailey
C-K Lee
K Kim
W H Barry
N M Chapman
University of Nebraska Medical Center · USUniversity of Nebraska at Omaha · USUniversity of Utah · US

Funding

ZINC FINGER-INSPIRED FLUORESCENT CHEMOSENSORSP20RR016469 · NCRR · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI TURPEN, JAMES B · 2001 to 2011
$36.2M
Group B Coxsackievirus VectorsR21AI049540 · NIAID · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI TRACY, STEVEN M · 2002 to 2002
$282k
Enterovirus persistence in myocarditisR03AI053196 · NIAID · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CHAPMAN, NORA M. · 2002 to 2003
$147k
NCRR NIH HHS P20 RR016469NCRR NIH HHS P20 RR16469NIAID NIH HHS R03 AI053196NIAID NIH HHS R03AI053196NIAID NIH HHS R21AI49540-01A1
6 · The paper itself

Abstract

Adult human enteroviral heart disease is often associated with the detection of enteroviral RNA in cardiac muscle tissue in the absence of infectious virus. Passage of coxsackievirus B3 (CVB3) in adult murine cardiomyocytes produced CVB3 that was noncytolytic in HeLa cells. Detectable but noncytopathic CVB3 was also isolated from hearts of mice inoculated with CVB3. Sequence analysis revealed five classes of CVB3 genomes with 5' termini containing 7, 12, 17, 30, and 49 nucleotide deletions. Structural changes (assayed by chemical modification) in cloned, terminally deleted 5'-nontranslated regions were confined to the cloverleaf domain and localized within the region of the deletion, leaving key functional elements of the RNA intact. Transfection of CVB3 cDNA clones with the 5'-terminal deletions into HeLa cells generated noncytolytic virus (CVB3/TD) which was neutralized by anti-CVB3 serum. Encapsidated negative-strand viral RNA was detected using CsCl-purified CVB3/TD virions, although no negative-strand virion RNA was detected in similarly treated parental CVB3 virions. The viral protein VPg was detected on CVB3/TD virion RNA molecules which terminate in 5' CG or 5' AG. Detection of viral RNA in mouse hearts from 1 week to over 5 months postinoculation with CVB3/TD demonstrated that CVB3/TD virus strains replicate and persist in vivo. These studies describe a naturally occurring genomic alteration to an enteroviral genome associated with long-term viral persistence.

Indexed as

AnimalsBase SequenceCells, CulturedCytopathogenic Effect, ViralDNA, ViralEnterovirus B, HumanEnterovirus InfectionsGenome, ViralHeLa CellsHumansMaleMiceMice, Inbred AMolecular Sequence DataMyocarditisMyocytes, CardiacDNA, ViralRNA, Viral

Identifiers

PMID15890942
PMCPMC1112132
OpenAlexW2148270513

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.