Evidence map›Paper›PMID 15888660›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience2005

Functional characterization and neuronal modeling of the effects of childhood absence epilepsy variants of CACNA1H, a T-type calcium channel.

Iuliia Vitko, Yucai Chen, Juan M Arias, Yen Shen, Xi-Ru Wu, Edward Perez-Reyes

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 180 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. CaHandbook of experimental pharmacology · 2023
    Article
  6. Article
  7. CaInternational journal of molecular sciences · 2022
    Review
  8. Screening Platforms for Genetic Epilepsies-Zebrafish, iPSC-Derived Neurons, and Organoids.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2021
    Review
  9. Neuronal Cav3 channelopathies: recent progress and perspectives.Pflugers Archiv : European journal of physiology · 2020
    Review
  10. Article
  11. Review
  12. Genetic T-type calcium channelopathies.Journal of medical genetics · 2020
    Review
  13. Article
  14. Review
  15. Article
  16. A common haplotype containing functional CACNA1H variants is frequently coinherited with increased TPSAB1 copy number.Genetics in medicine : official journal of the American College of Medical Genetics · 2018
    Article
  17. Article
  18. Review
  19. Calmodulin regulates CaThe Journal of biological chemistry · 2017
    Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Iuliia VitkoDepartment of Pharmacology, University of Virginia, Charlottesville, Virginia 22908, USA.
Yucai Chen
Juan M Arias
Yen Shen
Xi-Ru Wu
Edward Perez-Reyes
University of Virginia · USPeking University First Hospital · CNChinese National Human Genome Center · CN

Funding

MOLECULAR ANALYSIS OF NEURONAL T TYPE CALCIUM CHANNELSR01NS038691 · NINDS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI PEREZ-REYES, EDWARD · 1999 to 2007
$2.7M
NINDS NIH HHS NS038691NINDS NIH HHS R01 NS038691
6 · The paper itself

Abstract

Sequencing of the T-type Ca2+ channel gene CACNA1H revealed 12 nonsynonymous single nucleotide polymorphisms (SNPs) that were found only in childhood absence epilepsy (CAE) patients. One SNP, G773D, was found in two patients. The present study reports the finding of a third patient with this SNP, as well as analysis of their parents. Because of the role of T-channels in determining the intrinsic firing patterns of neurons involved in absence seizures, it was suggested that these SNPs might alter channel function. The goal of the present study was to test this hypothesis by introducing these polymorphisms into a human Ca(v)3.2a cDNA and then study alterations in channel behavior using whole-cell patch-clamp recording. Eleven SNPs altered some aspect of channel gating. Computer simulations predict that seven of the SNPs would increase firing of neurons, with three of them inducing oscillations at similar frequencies, as observed during absence seizures. Three SNPs were predicted to decrease firing. Some CAE-specific SNPs (e.g., G773D) coexist with SNPs also found in controls (R788C); therefore, the effect of these polymorphisms were studied. The R788C SNP altered activity in a manner that would also lead to enhanced burst firing of neurons. The G773D-R788C combination displayed different behavior than either single SNP. Therefore, common polymorphisms can alter the effect of CAE-specific SNPs, highlighting the importance of sequence background. These results suggest that CACNA1H is a susceptibility gene that contributes to the development of polygenic disorders characterized by thalamocortical dysrhythmia, such as CAE.

Indexed as

Models, NeurologicalCalcium Channels, T-TypeCell LineDose-Response Relationship, RadiationElectric StimulationEpilepsy, AbsenceExcitatory Postsynaptic PotentialsFemaleHumansKineticsMaleMembrane PotentialsMutagenesis, Site-DirectedNeuronsPatch-Clamp TechniquesPolymorphism, Single NucleotideCACNA1H protein, humanCalcium Channels, T-Type

Identifiers

PMID15888660
PMCPMC6724770
OpenAlexW2049006504

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.