Evidence map›Paper›PMID 15877080›Full record

ArticleEMBO reports2005

Glutamyl-tRNA mediates a switch in RNA polymerase use during chloroplast biogenesis.

Mitsumasa Hanaoka, Kengo Kanamaru, Makoto Fujiwara, Hideo Takahashi, Kan Tanaka

Open access · greenAbstract readComparative Study
In one paragraph

Article in EMBO reports, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 102 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Albino Plant Formation in Androgenic Cultures: An Old Problem and New Facts.Methods in molecular biology (Clifton, N.J.) · 2021
    Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. UMP Kinase Regulates Chloroplast Development and Cold Response in Rice.International journal of molecular sciences · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Mitsumasa HanaokaInstitute of Molecular and Cellular Biosciences, The University of Tokyo, 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-0032, Japan.
Kengo Kanamaru
Makoto Fujiwara
Hideo Takahashi
Kan Tanaka
The University of Tokyo · JPKobe University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chloroplast genes of higher plants are transcribed by two types of RNA polymerase that are encoded by nuclear (NEP (nuclear-encoded plastid RNA polymerase)) or plastid (PEP (plastid-encoded plastid RNA polymerase)) genomes. NEP is largely responsible for the transcription of housekeeping genes during early chloroplast development. Subsequent light-dependent chloroplast maturation is accompanied by repression of NEP activity and activation of PEP. Here, we show that the plastid-encoded transfer RNA for glutamate, the expression of which is dependent on PEP, directly binds to and inhibits the transcriptional activity of NEP in vitro. The plastid tRNA(Glu) thus seems to mediate the switch in RNA polymerase usage from NEP to PEP during chloroplast development.

Indexed as

Gene Expression Regulation, EnzymologicArabidopsisArabidopsis ProteinsBase SequenceBlotting, NorthernBlotting, WesternChloroplastsCloning, MolecularDNA-Directed RNA PolymerasesDNA PrimersEnzyme ActivationMolecular Sequence DataOligonucleotides, AntisenseRNA, Transfer, Amino AcylArabidopsis ProteinsDNA-Directed RNA PolymerasesDNA PrimersOligonucleotides, AntisenseRNA, Transfer, Amino Acyl

Identifiers

PMID15877080
PMCPMC1369087
OpenAlexW2079681091

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.