Evidence map›Paper›PMID 15870320›Full record

ArticleApplied and environmental microbiology2005

Construction of a ColD cda promoter-based SOS-green fluorescent protein whole-cell biosensor with higher sensitivity toward genotoxic compounds than constructs based on recA, umuDC, or sulA promoters.

Anders Norman, Lars Hestbjerg Hansen, Søren J Sørensen

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  14. Transcription termination controls prophage maintenance in Escherichia coli genomes.Proceedings of the National Academy of Sciences of the United States of America · 2013
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  19. Bacterial genotoxicity bioreporters.Microbial biotechnology · 2010
    Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Anders NormanDepartment of Microbiology, University of Copenhagen, Sølvgade 83H, 1307 Copenhagen K, Denmark. hestbjerg@bi.ku.dk
Lars Hestbjerg Hansen
Søren J Sørensen

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Four different green fluorescent protein (GFP)-based whole-cell biosensors were created based on the DNA damage inducible SOS response of Escherichia coli in order to evaluate the sensitivity of individual SOS promoters toward genotoxic substances. Treatment with the known carcinogen N-methyl-N'-nitro-N-nitrosoguanidine (MNNG) revealed that the promoter for the ColD plasmid-borne cda gene had responses 12, 5, and 3 times greater than the recA, sulA, and umuDC promoters, respectively, and also considerably higher sensitivity. Furthermore, we showed that when the SOS-GFP construct was introduced into an E. coli host deficient in the tolC gene, the minimal detection limits toward mitomycin C, MNNG, nalidixic acid, and formaldehyde were lowered to 9.1 nM, 0.16 microM, 1.1 microM, and 141 microM, respectively, which were two to six times lower than those in the wild-type strain. This study thus presents a new SOS-GFP whole-cell biosensor which is not only able to detect minute levels of genotoxins but, due to its use of the green fluorescent protein, also a reporter system which should be applicable in high-throughput screening assays as well as a wide variety of in situ detection studies.

Indexed as

Biosensing TechniquesPromoter Regions, GeneticSOS Response, GeneticsBase SequenceDNA-Directed DNA PolymeraseEscherichia coliEscherichia coli ProteinsGreen Fluorescent ProteinsMethylnitronitrosoguanidineMolecular Sequence DataPlasmidsRec A RecombinasesDNA-Directed DNA PolymeraseEscherichia coli ProteinsGreen Fluorescent ProteinsMethylnitronitrosoguanidineRec A RecombinasessulA protein, E coliUmuC protein, E coliUmuD protein, E coli

Identifiers

PMID15870320
PMCPMC1087587

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.