Evidence map›Paper›PMID 15870268›Full record

ArticleMolecular and cellular biology2005

The yeast chromatin remodeler RSC complex facilitates end joining repair of DNA double-strand breaks.

Eun Yong Shim, Jia-Lin Ma, Ji-Hyun Oum, Yvonne Yanez, Sang Eun Lee

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
6.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Histone modification inComputational and structural biotechnology journal · 2023
    Review
  8. Article
  9. Article
  10. Review
  11. Histone sumoylation and chromatin dynamics.Nucleic acids research · 2021
    Review
  12. Article
  13. Article
  14. Review
  15. Chromatin Remodeling and Epigenetic Regulation in Plant DNA Damage Repair.International journal of molecular sciences · 2019
    Review
  16. Article
  17. Article
  18. DNA repair goes hip-hop: SMARCA and CHD chromatin remodellers join the break dance.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2017
    Review
  19. Article
  20. Consider the workhorse: Nonhomologous end-joining in budding yeast.Biochemistry and cell biology = Biochimie et biologie cellulaire · 2016
    Review

26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Eun Yong ShimDepartment of Molecular Medicine and Institute of Biotechnology, University of Texas Health Science Center at San Antonio, 15355 Lambda Drive, San Antonio, TX 78245, USA.
Jia-Lin Ma
Ji-Hyun Oum
Yvonne Yanez
Sang Eun Lee
The University of Texas Health Science Center at San Antonio · US

Funding

Mechanisms of Error Prone Repair of DNA BreaksR01GM071011 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI LEE, SANG EUN · 2004 to 2021
$4.5M
Mechanisms of Nonhomologous Repair of Damaged DNAR01ES012244 · NIEHS · UNIVERSITY OF TEXAS HLTH SCI CTR SAN ANT · PI LEE, SANG EUN · 2003 to 2005
$752k
NIEHS NIH HHS ES12244NIEHS NIH HHS R01 ES012244NIGMS NIH HHS GM071011NIGMS NIH HHS R01 GM071011
6 · The paper itself

Abstract

Repair of chromosome double-strand breaks (DSBs) is central to cell survival and genome integrity. Nonhomologous end joining (NHEJ) is the major cellular repair pathway that eliminates chromosome DSBs. Here we report our genetic screen that identified Rsc8 and Rsc30, subunits of the Saccharomyces cerevisiae chromatin remodeling complex RSC, as novel NHEJ factors. Deletion of RSC30 gene or the C-terminal truncation of RSC8 impairs NHEJ of a chromosome DSB created by HO endonuclease in vivo. rsc30Delta maintains a robust level of homologous recombination and the damage-induced cell cycle checkpoints. By chromatin immunoprecipitation, we show recruitment of RSC to a chromosome DSB with kinetics congruent with its involvement in NHEJ. Recruitment of RSC to a DSB depends on Mre11, Rsc30, and yKu70 proteins. Rsc1p and Rsc2p, two other RSC subunits, physically interact with yKu80p and Mre11p. The interaction of Rsc1p with Mre11p appears to be vital for survival from genotoxic stress. These results suggest that chromatin remodeling by RSC is important for NHEJ.

Indexed as

Chromatin Assembly and DisassemblyDNA DamageDNA RepairAmino Acid SequenceCell CycleChromatinChromosomal Proteins, Non-HistoneDeoxyribonucleases, Type II Site-SpecificDNA-Binding ProteinsDNA, FungalEndodeoxyribonucleasesExodeoxyribonucleasesGenes, FungalGenetic Complementation TestMolecular Sequence DataPhenotypeChromatinChromosomal Proteins, Non-HistoneDeoxyribonucleases, Type II Site-SpecificDNA-Binding ProteinsDNA, FungalEndodeoxyribonucleasesExodeoxyribonucleaseshigh affinity DNA-binding factor, S cerevisiaeHO protein, S cerevisiaeMRE11 protein, S cerevisiaeProtein SubunitsRSC1 protein, S cerevisiaeRSC2 protein, S cerevisiaeRSC complex, S cerevisiaeSaccharomyces cerevisiae ProteinsSCEI protein, S cerevisiaeTranscription FactorsYKU70 protein, S cerevisiae

Identifiers

PMID15870268
PMCPMC1087737
OpenAlexW2106466938

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.