Evidence map›Paper›PMID 15864436›Full record

ArticleGlycoconjugate journal2005

Activation of CMV promoter-controlled glycosyltransferase and beta -galactosidase glycogenes by butyrate, tricostatin A, and 5-aza-2'-deoxycytidine.

Kyung Hyun Choi, Hesham Basma, Jaswant Singh, Pi-Wan Cheng

Abstract read
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In one paragraph

Article in Glycoconjugate journal, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 83 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Kyung Hyun ChoiDepartment of Biochemistry and Molecular Biology, College of Medicine, University of Nebraska Medical Center, Omaha, 68198-5870, USA.
Hesham Basma
Jaswant Singh
Pi-Wan Cheng
University of Nebraska Medical Center · USNebraska Medical Center · US

Funding

BIOSYNTHESIS OF TRACHEAL MUCOUS GLYCOPROTEINSR01HL048282 · NHLBI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI CHENG, PI-WAN · 1995 to 2010
$2.2M
GENE TRANSFER TO AIRWAY EPITHELIAL CELLSR01HL056190 · NHLBI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI CHENG, PI-WAN · 1998 to 2000
$195k
NHLBI NIH HHS HL56190NHLBI NIH HHS R01 HL 48282
6 · The paper itself

Abstract

Cytomegalovirus (CMV) immediate early promoter is a powerful promoter frequently used for driving the expression of transgenes in mammalian cells. However, this promoter gradually becomes silenced in stably transfected cells. We employed Chinese Hamster Ovary (CHO) and human pancreatic cancer (Panc 1) cells stably tansfected with three glycogenes driven by a CMV promoter to study the activation of silenced glycogenes. We found that butyrate, tricostatin A (TSA), and 5-aza-2'-deoxycytidine (5-Aza-dC) can activate these CMV-driven glycogenes. The increase in mRNA and protein of a glycogene occurred 8-10 h after butyrate treatment, suggesting an indirect effect of butyrate in the activation of the transgene. The enhanced expression of the trangenes by butyrate and TSA, known inhibitors of histone deacetylase, was independent of the transgene or cell type. However, the transgene can be activated by these two agents in only a fraction of the cells derived from a single clone, suggesting that inactivation of histone deacetylase can only partially explain silencing of the transgenes. Combination treatment of one or both agents with 5-Aza-dC, a known inhibitor of DNA methylase, resulted in a synergistic activation of the transgene, suggesting a cross-talk between histone acetylation and DNA demethylation. Understanding the mechanisms of the inactivation and reactivation of CMV promoter-controlled transgenes should help develop an effective strategy to fully activate the CMV promoter-controlled therapeutic genes silenced by the host cells.

Indexed as

Promoter Regions, GeneticAnimalsAzacitidinebeta-GalactosidaseButyratesCell Line, TumorCricetinaeCricetulusCytomegalovirusDecitabineDNA Modification MethylasesDrug SynergismEnzyme ActivationGene Expression Regulation, EnzymologicGene SilencingGlycosyltransferasesAzacitidinebeta-GalactosidaseButyratesDecitabineDNA Modification MethylasesGlycosyltransferasesHistone Deacetylase InhibitorsHydroxamic AcidsRNA, Messengertrichostatin A

Identifiers

PMID15864436
OpenAlexW2020293117

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.