ArticleJournal of virology2005
Papillomavirus subtypes are natural and old taxa: phylogeny of human papillomavirus types 44 and 55 and 68a and -b.
Article in Journal of virology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
17 citing papers in PubMed.
- Molecular Insights into HPV-Driven Cervical Cancer: Oncoproteins, Immune Evasion, and Epigenetic Modifications.Microorganisms · 2025Review
- The role of viruses in cancer development versus cancer therapy: An oncological perspective.Cancer medicine · 2023Review
- Genetic variability of human papillomavirus type 66 L1 gene among women presenting for cervical cancer screening in Chile.Medical microbiology and immunology · 2019Article
- Discovery, characterisation and genomic variation of six novel Gammapapillomavirus types from penile swabs in South Africa.Papillomavirus research (Amsterdam, Netherlands) · 2019Article
- Molecular characterisation of genital human papillomavirus among women in Southwestern, Nigeria.PloS one · 2019Article
- HPViewer: sensitive and specific genotyping of human papillomavirus in metagenomic DNA.Bioinformatics (Oxford, England) · 2018Article
- Retinoic acid receptor beta promoter methylation and risk of cervical cancer.World journal of virology · 2018Review
- Review
- Multiple human papillomavirus infections with high viral loads are associated with cervical lesions but do not differentiate grades of cervical abnormalities.Journal of clinical microbiology · 2013Article
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- Article
- HPV-DNA integration and carcinogenesis: putative roles for inflammation and oxidative stress.Future virology · 2011Article
- Classification of papillomaviruses (PVs) based on 189 PV types and proposal of taxonomic amendments.Virology · 2010Article
- Detection of HPV types and neutralizing antibodies in women with genital warts in Tianjin City, China.Virologica Sinica · 2010Article
- Human papillomaviruses: genetic basis of carcinogenicity.Public health genomics · 2009Review
- Divergence and recombination of clinical herpes simplex virus type 2 isolates.Journal of virology · 2007Article
- Worldwide genomic diversity of the high-risk human papillomavirus types 31, 35, 52, and 58, four close relatives of human papillomavirus type 16.Journal of virology · 2005Article
Corrections and comments
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Authors and funding
14 authors.
Funding
Abstract
A human papillomavirus (HPV) type is defined as an HPV isolate whose L1 gene sequence is at least 10% different from that of any other type, while a subtype is 2 to 10% different from any HPV type. In order to analyze the phylogeny behind the subtype definition, we compared 49 isolates of HPV type 44 (HPV-44) and its subtype HPV-55, previously misclassified as a separate type, and 41 isolates of the subtype pair HPV-68a and -b, sampled from cohorts in four continents. The subtypes of each pair are separated by deep dichotomic branching, and three of the four subtypes have evolved large phylogenetic clusters of genomic variants forming a "star" phylogeny, with some branches specific for ethnically defined cohorts. We conclude that subtypes of HPV types are natural and old taxa, equivalent to types, which either diverged more recently than types or evolved more slowly.
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