Evidence map›Paper›PMID 15852235›Full record

ArticleAmerican journal of human genetics2005

Germline BHD-mutation spectrum and phenotype analysis of a large cohort of families with Birt-Hogg-Dubé syndrome.

Laura S Schmidt, Michael L Nickerson, Michelle B Warren, Gladys M Glenn, Jorge R Toro, Maria J Merino, Maria L Turner, Peter L Choyke, Nirmala Sharma, James Peterson and 5 more

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in American journal of human genetics, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 171 papers, 6 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
171citing papers in PubMed, 6 pooled it
13.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

171 citing papers in PubMed, 6 syntheses or guidelines pooled it, 410 citations in OpenAlex.

  1. Guideline
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  16. Journal of the Endocrine Society · 2025
    Article
  17. Article
  18. Rare genetic interstitial lung diseases: a pictorial essay.European respiratory review : an official journal of the European Respiratory Society · 2024
    Review
  19. Article
  20. Article

111 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 9 institutions in 2 countries.

Laura S SchmidtBasic Research Program, Science Applications International Corporation-Frederick Inc., Frederick, MD, USA. schmidtl@ncifcrf.gov
Michael L Nickerson
Michelle B Warren
Gladys M Glenn
Jorge R Toro
Maria J Merino
Maria L Turner
Peter L Choyke
Nirmala Sharma
James Peterson
Patrick Morrison
Eamonn R Maher
McClellan M Walther
Berton Zbar
W Marston Linehan
Center for Cancer Research · USNational Institutes of Health · USBelfast City Hospital · GBCancer Genetics (United States) · USDivision of Cancer Epidemiology and GeneticsFrederick National Laboratory for Cancer Research · USNational Institutes of Health Clinical Center · USScience Applications International Corporation (United States) · USUniversity of Birmingham · GB

Funding

Study of Hereditary Renal and Other Familial SyndromesZIABC010696 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MERINO, MARIA · 2009 to 2025
$4.5M
TUMOR SUPPRESSOR GENES IN GENITOURINARY MALIGNANCYZ01SC006659 · SC · CLINICAL SCIENCES · PI LINEHAN, WILLIAM MARSTON · 1996 to 2007
$4.0M
Dermatology Consultation Clinic and Clinical ResearchZ01BC010688 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TURNER, MARIA L · 2005 to 2008
$1.6M
Dermatology Consultation Clinic and Clinical ResearchZIDBC010688 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI TURNER, MARIA L · 2009 to 2009
$1.4M
Study of Hereditary Renal SyndromesZ01BC010696 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI MERINO NEUMANN, MARIA · 2005 to 2008
$697k
Proteomic Analysis of Renal TumorsZ01SC009392 · SC · DIVISION OF CLINICAL SCIENCES - NCI · PI MERINO NEUMANN, MARIA · 1996 to 2008
$585k
Proteomic Analysis of Renal TumorsZIASC009392 · NCI · DIVISION OF CLINICAL SCIENCES - NCI · PI MERINO, MARIA · 2009 to 2010
$480k
PHS HHS N01-C0-12400
6 · The paper itself

Abstract

Birt-Hogg-Dubé syndrome (BHD), a genodermatosis characterized by multiple hamartomas of the hair follicle (fibrofolliculoma), predisposes individuals to an increased risk of developing renal neoplasms and spontaneous pneumothorax. Previously, we localized the BHD locus (also known as FLCN) to chromosome 17p11.2 by linkage analysis and subsequently identified germline mutations in a novel gene in probands from eight of the nine families with BHD in our screening panel. Affected members of five of the families inherited an insertion/deletion of a cytosine in a C8 tract in exon 11. This mutation was also identified by exon 11 screening in probands from 22 of 52 additional families with BHD and therefore represents a hypermutable "hotspot" for mutation in BHD. Here, we screened the remaining 30 families from this large BHD cohort by direct sequence analysis and identified germline BHD mutations in 84% (51/61) of all families with BHD recruited to our study. Mutations were located along the entire length of the coding region, including 16 insertion/deletion, 3 nonsense, and 3 splice-site mutations. The majority of BHD mutations were predicted to truncate the BHD protein, folliculin. Among patients with a mutation in the exon 11 hotspot, significantly fewer renal tumors were observed in patients with the C-deletion than those with the C-insertion mutation. Coding-sequence mutations were not found, however, in probands from two large families with BHD whose affected members shared their family's BHD-affected haplotype. Of the 53 families with BHD whose members inherited either a germline mutation or the affected haplotype, 24 (45%) had at least one member with renal neoplasms. Three families classified with familial renal oncocytoma were identified with BHD mutations, which represents the first disease gene associated with this rare form of renal neoplasm. This study expands the BHD-mutation spectrum and evaluates genotype-phenotype correlations among families with BHD.

Indexed as

Germ-Line MutationPhenotypeAdenoma, OxyphilicCohort StudiesExonsFemaleGene FrequencyGenetic TestingHaplotypesHeterozygoteHumansIntronsKidney NeoplasmsMaleNuclear FamilyPatient SelectionFLCN protein, humanProteinsProto-Oncogene ProteinsTumor Suppressor Proteins

Identifiers

PMID15852235
PMCPMC1196440
OpenAlexW1981403280

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.