Evidence map›Paper›PMID 15849018›Full record

ReviewAddiction biology2005

Expression profiling and QTL analysis: a powerful complementary strategy in drug abuse research.

John Spence, Tiebing Liang, Tatiana Foroud, David Lo, Lucinda Carr

Abstract readReview
In one paragraph

Review in Addiction biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. PlacentalExploration of medicine · 2020
    Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Integrated gene expression profiling and linkage analysis in the rat.Mammalian genome : official journal of the International Mammalian Genome Society · 2006
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

John SpenceDepartment of Medicine, Indiana University School of Medicine, Indianapolis, IN 46202, USA.
Tiebing Liang
Tatiana Foroud
David Lo
Lucinda Carr

Funding

Translational Research and Science Education (OUT)P60AA007611 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI DAVID A. KAREKEN · 2003 to 2026
$45.5M
RAT RESEARCH COMPONENTP50AA007611 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI CHRISTIAN, JOE C · 1987 to 2002
$5.3M
QTL MAPPING OF ALCOHOL PREFERENCE IN SELECTED RAT LINESR01AA010707 · NIAAA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI LIANG, TIEBING · 1995 to 2008
$2.8M
NIAAA NIH HHS AA00285NIAAA NIH HHS AA07611NIAAA NIH HHS AA10707NIAAA NIH HHS P50 AA007611NIAAA NIH HHS P60 AA007611NIAAA NIH HHS R01 AA010707
6 · The paper itself

Abstract

Alcoholism is a complex disease exhibiting a multifactorial mode of transmission. To simplify the genetic and phenotypic complexity of the alcoholic phenotype, alcohol-preferring (P) and -non-preferring (NP) rats were developed on the basis of alcohol preference and consumption as an animal model of alcoholism. Total gene expression analysis (TOGA) and quantitative trait loci (QTL) analysis were applied to selectively bred, inbred P and NP rats as complementary studies to identify genetic factors that contribute to alcohol preference and consumption. TOGA analysis was utilized to screen for differential expression in several brain regions involved in the mesocorticolimbic dopamine (DA) system. Genes exhibiting differences in expression were then screened for an association to the alcohol preference phenotype, the quantitative trait of a previously identified QTL. By evaluating differences in gene expression for linkage to a quantitative trait, this combined approach was implemented to identify alpha-synuclein, a candidate gene for alcohol preference.

Indexed as

AnimalsBehavior, AnimalChoice BehaviorDNA, ComplementaryGene ExpressionGene Expression ProfilingPhenotypeQuantitative Trait LociRatsRNA, MessengerSubstance-Related DisordersDNA, ComplementaryRNA, Messenger

Identifiers

PMID15849018
PMCPMC4560094

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.