Evidence map›Paper›PMID 15847915›Full record

ArticleJournal of virological methods2005

The use of endogenous and exogenous reference RNAs for qualitative and quantitative detection of PRRSV in porcine semen.

Sandra Revilla-Fernández, Barbara Wallner, Klaus Truschner, Alexandra Benczak, Gottfried Brem, Friedrich Schmoll, Mathias Mueller, Ralf Steinborn

Abstract readEvaluation Study
In one paragraph

Article in Journal of virological methods, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
3.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

  1. Safety and efficacy of a novel European vaccine for porcine reproductive and respiratory virus in bred gilts.Canadian journal of veterinary research = Revue canadienne de recherche veterinaire · 2016
    Trial
  2. Safety and early onset of immunity with a novel European porcine reproductive and respiratory syndrome virus vaccine in young piglets.Canadian journal of veterinary research = Revue canadienne de recherche veterinaire · 2016
    Trial
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Sandra Revilla-FernándezInstitute of Animal Breeding and Genetics, Department for Animal Breeding and Reproduction, University of Veterinary Medicine, Veterinaerplatz 1, A-1210 Vienna, Austria.
Barbara Wallner
Klaus Truschner
Alexandra Benczak
Gottfried Brem
Friedrich Schmoll
Mathias Mueller
Ralf Steinborn
University of Veterinary Medicine Vienna · ATLudwig Boltzmann Institute for Cancer Research · ATLudwig Boltzmann Institute for Digital Health and Prevention

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Semen is known to be a route of porcine reproductive and respiratory syndrome virus (PRRSV) transmission. A method was developed for qualitative and quantitative detection of the seminal cell-associated PRRSV RNA in relation to endogenous and exogenous reference RNAs. As endogenous control for one-step real-time reverse transcription (RT)-PCR UBE2D2 mRNA was selected. Particularly for the analysis of persistent infections associated with low copy numbers of PRRSV RNA, UBE2D2 mRNA is an ideal control due to its low expression in seminal cells and its detection in all samples analysed (n = 36). However, the amount of UBE2D2 mRNA in porcine semen varied (up to 106-fold), thus its use is limited to qualitative detection of PRRSV RNA. For quantitation, a synthetic, non-metazoan RNA was added to the RNA isolation reaction at an exact copy number. The photosynthesis gene ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (rbcL) from Arabidopsis thaliana was used as an exogenous spike. Unexpectedly, PRRSV RNA was detected in a herd of specific pathogen-free (SPF) boars which were tested ELISA-negative for anti-PRRSV antibodies. Therefore, RT-PCR for seminal cell-associated PRRSV is a powerful tool for managing the SPF status during quarantine programs and for routine outbreak investigations.

Indexed as

AnimalsMolecular Sequence DataPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusReference StandardsReverse Transcriptase Polymerase Chain ReactionRibulose-Bisphosphate CarboxylaseRNA, MessengerRNA, ViralSemenSensitivity and SpecificitySequence Analysis, DNASwineUbiquitin-Conjugating EnzymesRbcL protein, plastidRibulose-Bisphosphate CarboxylaseRNA, MessengerRNA, ViralUbiquitin-Conjugating Enzymes

Identifiers

PMID15847915
PMCPMC7112884
OpenAlexW2062453674

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.