Evidence map›Paper›PMID 15846457›Full record

ArticlePharmaceutical research2005

In vitro and pharmacophore-based discovery of novel hPEPT1 inhibitors.

Sean Ekins, Jeffrey S Johnston, Praveen Bahadduri, Vanessa M D'Souza, Abhijit Ray, Cheng Chang, Peter W Swaan

Abstract read
PubMed Publisher
In one paragraph

Article in Pharmaceutical research, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 63 citations in OpenAlex.

  1. Review
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  13. Membrane transporters in drug development.Nature reviews. Drug discovery · 2010
    Review
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  18. Bacterial peptide recognition and immune activation facilitated by human peptide transporter PEPT2.American journal of respiratory cell and molecular biology · 2008
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sean EkinsGeneGo, Inc., St Joseph, Michigan 49085, USA.
Jeffrey S Johnston
Praveen Bahadduri
Vanessa M D'Souza
Abhijit Ray
Cheng Chang
Peter W Swaan
University of Maryland, Baltimore · USThe Ohio State University · US

Funding

Structural Biology of the Apical Bile Acid Transporter.R01DK061425 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI SWAAN, PETER W · 2003 to 2020
$4.6M
Epithelial Transport and Function of RiboflavinR01DK056631 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI SWAAN, PETER W · 2001 to 2003
$597k
NIDDK NIH HHS DK56631NIDDK NIH HHS DK61425
6 · The paper itself

Abstract

purposeThe human proton-coupled small peptide carrier (hPEPT1) is a low-affinity, high-capacity transporter with broad substrate specificity. We have taken an iterative in vitro and in silico approach to the discovery of molecules with hPEPT1 affinity.

methodsA pharmacophore-based approach was taken to identifying hPEPT1 inhibitors. The well-characterized and relatively high affinity ligands Gly-Sar, bestatin, and enalapril were used to generate a common features (HIPHOP) pharmacophore. This consisted of two hydrophobic features, a hydrogen bond donor, acceptor, and a negative ionizable feature.

resultsThe pharmacophore was used to search the Comprehensive Medicinal Chemistry (CMC) database of more than 8000 drug-like molecules and retrieved 145 virtual hits mapping to the pharmacophore features. The highest scoring compounds within this set were selected and tested in a stably transfected CHO-hPepT1 cell model. The antidiabetic repaglinide and HMG CoA reductase inhibitor fluvastatin were found to inhibit hPEPT1 with sub-millimolar potency (IC(50) 178 +/- 1.0 and 337 +/- 4 microM, respectively). The pharmacophore was also able to identify known hPEPT1 substrates and inhibitors in further database mining of more than 500 commonly prescribed drugs.

conclusionsThis study demonstrates the potential of combining computational and in vitro approaches to determine the affinity of compounds for hPEPT1 and, in turn, provides insights into key molecular interactions with this transporter.

Indexed as

Drug DesignAnimalsAspartameCarbamatesCell LineCHO CellsComputer SimulationCricetinaeCricetulusDatabases, FactualDipeptidesFatty Acids, MonounsaturatedFluvastatinIndolesLigandsModels, MolecularAspartameCarbamatesDipeptidesFatty Acids, MonounsaturatedFluvastatinglycylsarcosineIndolesLigandsPeptide Transporter 1PiperidinesrepaglinideSLC15A1 protein, humanSymporters

Identifiers

PMID15846457
OpenAlexW2019258148

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.