Evidence map›Paper›PMID 15843437›Full record

ArticleAmerican journal of physiology. Cell physiology2005

Evidence that the COOH terminus of human presenilin 1 is located in extracytoplasmic space.

Young S Oh, R James Turner

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Cell physiology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 19 citations in OpenAlex.

  1. Cooperative roles of hydrophilic loop 1 and the C-terminus of presenilin 1 in the substrate-gating mechanism of γ-secretase.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
  2. Article
  3. Article
  4. Review
  5. The GxGD motif of presenilin contributes to catalytic function and substrate identification of gamma-secretase.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Young S OhMembrane Biology Section, Gene Therapy and Therapeutics Branch, National Institute of Dental and Craniofacial Research, National Institutes of Health, Bethesda, MD 20892-1190, USA. yoh@mail.nih.gov
R James Turner
National Institutes of Health · US

Funding

ION TRANSPORT AND FLUID SECRETION IN SALIVARY GLANDSZ01DE000415 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI TURNER, ROY JAMES · 1986 to 2008
$2.0M
Ion Transport And Fluid Secretion In Salivary GlandsZIADE000415 · NIDCR · NATIONAL INSTITUTE OF DENTAL & CRANIOFACIAL RESEARCH · PI TURNER, ROY JAMES · 2009 to 2009
$487k
CLINICAL EPIDEMIOLOGY OF MERCURY EXPOSURE IN DENTISTRYK23DE000415 · NIDCR · UNIVERSITY OF WASHINGTON · PI MARTIN, MICHAEL D · 1999 to 2003
$483k
NIDCR NIH HHS Z01 DE000415-20
6 · The paper itself

Abstract

The polytopic membrane protein presenilin 1 (PS1) is a component of the gamma-secretase complex that is responsible for the intramembranous cleavage of several type I transmembrane proteins, including the beta-amyloid precursor protein (APP). Mutations of PS1, apparently leading to aberrant processing of APP, have been genetically linked to early-onset familial Alzheimer's disease. PS1 contains 10 hydrophobic regions (HRs) sufficiently long to be alpha-helical membrane spanning segments. Most topology models for PS1 place its COOH terminal approximately 40 amino acids, which include HR 10, in the cytosolic space. However, several recent observations suggest that HR 10 may be integrated into the membrane and involved in the interaction between PS1 and APP. We have applied three independent methodologies to investigate the location of HR 10 and the extreme COOH terminus of PS1. The results from these methods indicate that HR 10 spans the membrane and that the COOH terminal amino acids of PS1 lie in the extracytoplasmic space.

Indexed as

Amino Acid SequenceCell LineEndopeptidase KGenes, ReporterGlycosylationHumansHydrophobic and Hydrophilic InteractionsKidneyMembrane ProteinsMolecular Sequence DataPresenilin-1Protein Structure, SecondaryProtein Structure, TertiaryEndopeptidase KMembrane ProteinsPresenilin-1PSEN1 protein, human

Identifiers

PMID15843437
PMCPMC1361293
OpenAlexW2158411892

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.