Evidence map›Paper›PMID 15840829›Full record

ArticleProtein science : a publication of the Protein Society2005

The crystal structure of calcium- and integrin-binding protein 1: insights into redox regulated functions.

Chad J Blamey, Christopher Ceccarelli, Ulhas P Naik, Brian J Bahnson

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Identification of Covalent Cyclic Peptide Inhibitors in mRNA Display.Journal of the American Chemical Society · 2023
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. CIB1: a small protein with big ambitions.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2016
    Review
  10. Article
  11. Article
  12. Review
  13. MetalS(3), a database-mining tool for the identification of structurally similar metal sites.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2014
    Article
  14. Article
  15. Article
  16. Article
  17. Auxiliary Ca2+ binding sites can influence the structure of CIB1.Protein science : a publication of the Protein Society · 2009
    Article
  18. The purification, crystallization and preliminary diffraction of a glycerophosphodiesterase from Enterobacter aerogenes.Acta crystallographica. Section F, Structural biology and crystallization communications · 2006
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chad J BlameyDepartment of Biological Sciences, University of Delaware, Newark, DE 19716, USA.
Christopher Ceccarelli
Ulhas P Naik
Brian J Bahnson
University of Delaware · USGTx (United States) · US

Funding

Understanding the molecular mechanism of pathogenesis of prion diseasesP20RR015583 · NCRR · UNIVERSITY OF MONTANA · PI KAVANAUGH, MICHAEL PATRICK · 2000 to 2009
$17.6M
X-RAY STUDY OF HORMONE-RECEPTOR AND PROTEIN-ANTIBODY COMPLEXESP41RR007707 · NCRR · UNIVERSITY OF CHICAGO · PI YANG, XIANGZHONG · 2002 to 2011
$17.3M
CHEMISTRY-BIOLOGY INTERFACE PREDOCTORAL TRAININGT32GM008550 · NIGMS · UNIVERSITY OF DELAWARE · PI BAHNSON, BRIAN J · 1994 to 2018
$5.0M
Modulation of integrin function by cytoplasmic signalsR01HL057630 · NHLBI · UNIVERSITY OF DELAWARE · PI NAIK, ULHAS P · 2004 to 2007
$1.3M
MODULATION OF INTEGRIN FUNCTION BY CYTOPLASMIC SIGNALINGR29HL057630 · NHLBI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI NAIK, ULHAS P · 1997 to 2001
$222k
NCRR NIH HHS P20 RR015583NCRR NIH HHS P20RR015583NCRR NIH HHS P41 RR007707NCRR NIH HHS RR07707NHLBI NIH HHS HL057630NHLBI NIH HHS R01 HL057630NHLBI NIH HHS R29 HL057630NIGMS NIH HHS T32 GM008550
6 · The paper itself

Abstract

Calcium- and integrin-binding protein 1 (CIB1) is involved in the process of platelet aggregation by binding the cytoplasmic tail of the alpha(IIb) subunit of the platelet-specific integrin alpha(Iib)beta(3). Although poorly understood, it is widely believed that CIB1 acts as a global signaling regulator because it is expressed in many tissues that do not express integrin alpha(Iib)beta(3). We report the structure of human CIB1 to a resolution of 2.3 A, crystallized as a dimer. The dimer interface includes an extensive hydrophobic patch in a crystal form with 80% solvent content. Although the dimer form of CIB1 may not be physiologically relevant, this intersub-unit surface is likely to be linked to alpha(IIb) binding and to the binding of other signaling partner proteins. The C-terminal domain of CIB1 is structurally similar to other EF-hand proteins such as calmodulin and calcineurin B. Despite structural homology to the C-terminal domain, the N-terminal domain of CIB1 lacks calcium-binding sites. The structure of CIB1 revealed a complex with a molecule of glutathione in the reduced state bond to the N-terminal domain of one of the two subunits poised to interact with the free thiol of C35. Glutathione bound in this fashion suggests CIB1 may be redox regulated. Next to the bound GSH, the orientation of residues C35, H31, and S48 is suggestive of a cysteine-type protein phosphatase active site. The potential enzymatic activity of CIB1 is discussed and suggests a mechanism by which it regulates a wide variety of proteins in cells in addition to platelets.

Indexed as

Amino Acid SequenceBinding SitesCalcium-Binding ProteinsCrystallography, X-RayDimerizationGlutathioneMolecular Sequence DataOxidation-ReductionProtein ConformationSequence Homology, Amino AcidCalcium-Binding ProteinsCIB1 protein, humanGlutathione

Identifiers

PMID15840829
PMCPMC2253279
OpenAlexW2015039299

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.