ArticleJournal of bacteriology2005
The genome of S-PM2, a "photosynthetic" T4-type bacteriophage that infects marine Synechococcus strains.
Article in Journal of bacteriology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 116 papers.
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116 citing papers in PubMed, 224 citations in OpenAlex.
- Isolation and Characterization of Six NovelPHAGE (New Rochelle, N.Y.) · 2024Article
- Coordinated transcriptional response to environmental stress by a Synechococcus virus.The ISME journal · 2024Article
- The Impact of Viral Infection on the Chemistries of the Earth's Most Abundant Photosynthesizes: Metabolically Talented Aquatic Cyanobacteria.Biomolecules · 2023Article
- An Estuarine Cyanophage S-CREM1 Encodes Three Distinct Antitoxin Genes and a Large Number of Non-Coding RNA Genes.Viruses · 2023Article
- Molecular evidence of parallel evolution in a cyanophage.PloS one · 2023Article
- Climate-Endangered Arctic Epishelf Lake Harbors Viral Assemblages with Distinct Genetic Repertoires.Applied and environmental microbiology · 2022Article
- Microbial Diversity and Phage-Host Interactions in the Georgian Coastal Area of the Black Sea Revealed by Whole Genome Metagenomic Sequencing.Marine drugs · 2020Article
- Genome Analysis of Two NovelViruses · 2020Article
- Genome Sequences ofMicrobiology resource announcements · 2020Article
- Metagenome Mining Reveals Hidden Genomic Diversity of Pelagimyophages in Aquatic Environments.mSystems · 2020Article
- Quantification of T4-Like and T7-Like Cyanophages Using the Polony Method Show They Are Significant Members of the Virioplankton in the North Pacific Subtropical Gyre.Frontiers in microbiology · 2020Article
- Genomic and Seasonal Variations among Aquatic Phages Infecting the Baltic Sea GammaproteobacteriumApplied and environmental microbiology · 2019Article
- Cyanophage MazG is a pyrophosphohydrolase but unable to hydrolyse magic spot nucleotides.Environmental microbiology reports · 2019Article
- Dynamic marine viral infections and major contribution to photosynthetic processes shown by spatiotemporal picoplankton metatranscriptomes.Nature communications · 2019Article
- Genomic Characterization of Cyanophage vB_AphaS-CL131 Infecting Filamentous Diazotrophic CyanobacteriumApplied and environmental microbiology · 2019Article
- Energy limitation of cyanophage development: implications for marine carbon cycling.The ISME journal · 2018Article
- F-CphI represents a new homing endonuclease family using the Endo VII catalytic motif.Mobile DNA · 2018Article
- Transcriptome Analysis of a Bloom-Forming CyanobacteriumFrontiers in microbiology · 2018Article
- Virus-host protein-protein interactions of mycobacteriophage Giles.Scientific reports · 2017Article
- Article
56 more citing papers are in PubMed but not listed here.
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Authors and funding
8 authors at 5 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Bacteriophage S-PM2 infects several strains of the abundant and ecologically important marine cyanobacterium Synechococcus. A large lytic phage with an isometric icosahedral head, S-PM2 has a contractile tail and by this criterion is classified as a myovirus (1). The linear, circularly permuted, 196,280-bp double-stranded DNA genome of S-PM2 contains 37.8% G+C residues. It encodes 239 open reading frames (ORFs) and 25 tRNAs. Of these ORFs, 19 appear to encode proteins associated with the cell envelope, including a putative S-layer-associated protein. Twenty additional S-PM2 ORFs have homologues in the genomes of their cyanobacterial hosts. There is a group I self-splicing intron within the gene encoding the D1 protein. A total of 40 ORFs, organized into discrete clusters, encode homologues of T4 proteins involved in virion morphogenesis, nucleotide metabolism, gene regulation, and DNA replication and repair. The S-PM2 genome encodes a few surprisingly large (e.g., 3,779 amino acids) ORFs of unknown function. Our analysis of the S-PM2 genome suggests that many of the unknown S-PM2 functions may be involved in the adaptation of the metabolism of the host cell to the requirements of phage infection. This hypothesis originates from the identification of multiple phage-mediated modifications of the host's photosynthetic apparatus that appear to be essential for maintaining energy production during the lytic cycle.
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