Evidence map›Paper›PMID 15835905›Full record

ArticleBiochemistry2005

The structure of the Candida albicans Ess1 prolyl isomerase reveals a well-ordered linker that restricts domain mobility.

Zhong Li, Hongmin Li, Gina Devasahayam, Trent Gemmill, Vishnu Chaturvedi, Steven D Hanes, Patrick Van Roey

Abstract readComparative Study
In one paragraph

Article in Biochemistry, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Antifungal Activity ofInternational journal of molecular sciences · 2021
    Article
  3. Review
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  8. Dimeric Structure of the Bacterial Extracellular Foldase PrsA.The Journal of biological chemistry · 2015
    Article
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zhong LiWadsworth Center, New York State Department of Health, School of Public Health, State University of New York, Albany, New York 12201-0509, USA.
Hongmin Li
Gina Devasahayam
Trent Gemmill
Vishnu Chaturvedi
Steven D Hanes
Patrick Van Roey
New York State Department of Health · USWadsworth Center · US

Funding

Yeast Ess1, a Conserved PPlase Essential for MitosisR01GM055108 · NIGMS · WADSWORTH CENTER · PI HANES, STEVEN D. · 1997 to 2010
$2.5M
NIGMS NIH HHS R01 GM055108NIGMS NIH HHS R01 GM55108
6 · The paper itself

Abstract

Ess1 is a peptidyl-prolyl cis/trans isomerase (PPIase) that binds to the carboxy-terminal domain (CTD) of RNA polymerase II. Ess1 is thought to function by inducing conformational changes in the CTD that control the assembly of cofactor complexes on the transcription unit. Ess1 (also called Pin1) is highly conserved throughout the eukaryotic kingdom and is required for growth in some species, including the human fungal pathogen Candida albicans. Here we report the crystal structure of the C. albicansEss1 protein, determined at 1.6 A resolution. The structure reveals two domains, the WW and the isomerase domain, that have conformations essentially identical to those of human Pin1. However, the linker region that joins the two domains is quite different. In human Pin1, this linker is short and flexible, and part of it is unstructured. In contrast, the fungal Ess1 linker is highly ordered and contains a long alpha-helix. This structure results in a rigid juxtaposition of the WW and isomerase domains, in an orientation that is distinct from that observed in Pin1, and that eliminates a hydrophobic pocket between the domains that was implicated as the main substrate recognition site. These differences suggest distinct modes of interaction with long substrate molecules, such as the CTD of RNA polymerase II. We also show that C. albicans ess1(-)() mutants are attenuated for in vivo survival in mice. Together, these results suggest that CaEss1 might constitute a useful antifungal drug target, and that structural differences between the fungal and human enzymes could be exploited for drug design.

Indexed as

Amino Acid SequenceAnimalsCandida albicansCrystallography, X-RayFemaleGenes, FungalHumansMiceMice, Inbred BALB CModels, MolecularMolecular Sequence DataMolecular StructureMutationNIMA-Interacting Peptidylprolyl IsomerasePeptidylprolyl IsomeraseProtein ConformationNIMA-Interacting Peptidylprolyl IsomerasePeptidylprolyl IsomerasePIN1 protein, humanPin1 protein, mouseRecombinant Proteins

Identifiers

PMID15835905
PMCPMC4773908
OpenAlexW2046127552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.