ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2005
Construction and characterization of BAC libraries from major grapevine cultivars.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.
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Who cites it
26 citing papers in PubMed, 55 citations in OpenAlex.
- Harnessing multivariate, penalized regression methods for genomic prediction and QTL detection of drought-related traits in grapevine.G3 (Bethesda, Md.) · 2021Article
- Identification of Selective Sweeps in the Domesticated Table and Wine Grape (Frontiers in plant science · 2020Article
- The control of endopolygalacturonase expression by the sugarcane RAV transcription factor during aerenchyma formation.Journal of experimental botany · 2019Article
- Analysis of Three Sugarcane Homo/Homeologous Regions Suggests Independent Polyploidization Events of Saccharum officinarum and Saccharum spontaneum.Genome biology and evolution · 2017Article
- Current Knowledge and Computational Techniques for Grapevine Meta-Omics Analysis.Frontiers in plant science · 2017Review
- BAC-pool sequencing and analysis confirms growth-associated QTLs in the Asian seabass genome.Scientific reports · 2016Article
- A knowledge base for Vitis vinifera functional analysis.BMC systems biology · 2015Article
- Building the sugarcane genome for biotechnology and identifying evolutionary trends.BMC genomics · 2014Article
- First insights into the large genome of Epimedium sagittatum (Sieb. et Zucc) Maxim, a Chinese Ttaditional medicinal plant.International journal of molecular sciences · 2013Article
- Advances in BAC-based physical mapping and map integration strategies in plants.Journal of biomedicine & biotechnology · 2012Review
- Article
- Analysis of high-identity segmental duplications in the grapevine genome.BMC genomics · 2011Article
- Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome.BMC genomics · 2011Article
- BAC library resources for map-based cloning and physical map construction in barley (Hordeum vulgare L.).BMC genomics · 2011Article
- Construction of papaya male and female BAC libraries and application in physical mapping of the sex chromosomes.Journal of biomedicine & biotechnology · 2011Article
- Physical mapping in highly heterozygous genomes: a physical contig map of the Pinot Noir grapevine cultivar.BMC genomics · 2010Article
- Characterization of a deep-coverage carrot (Daucus carota L.) BAC library and initial analysis of BAC-end sequences.Molecular genetics and genomics : MGG · 2009Article
- Neutral invertases in grapevine and comparative analysis with Arabidopsis, poplar and rice.Planta · 2008Article
- A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance.BMC plant biology · 2008Article
- Development of a transient expression system in grapevine via agro-infiltration.Plant cell reports · 2008Article
Corrections and comments
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Authors and funding
9 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Genome projects were initiated on grapevine (Vitis vinifera L., 2n=38, genome size 475 Mb) through the successful construction of four bacterial artificial chromosome (BAC) libraries from three major cultivars, Cabernet Sauvignon (Cabernet S), Syrah and two different clones of Pinot Noir (Pinot N). Depending on the library, the genome coverage represented 4.5-14.8 genome equivalents with clones having a mean insert size of 93-158 kb. BAC pools suitable for PCR screening were constructed for two of these BAC libraries [Cabernet S and Pinot N clone (cl) 115] and subsequently used to confirm the genome coverage of both libraries by PCR anchoring of 74 genetic markers sampled from the 19 linkage groups. For ten of these markers, two bands on separate BAC pools were differentiated that could correspond either to different alleles or to a duplication of the locus being studied. Finally, a preliminary assessment of the correspondence between genetic and physical distances was made through the anchoring of all the markers mapped along linkage group 1 of the V. vinifera genetic map. A pair of markers, 2.1 cM apart, anchored the same BAC clones, which allowed us to estimate that 1 cM corresponded in this particular region to a maximum length of 130 kb.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.