Evidence map›Paper›PMID 15833913›Full record

ArticleGenes & development2005

Functional uncoupling of MCM helicase and DNA polymerase activities activates the ATR-dependent checkpoint.

Tony S Byun, Marcin Pacek, Muh-ching Yee, Johannes C Walter, Karlene A Cimprich

Open access · diamondAbstract readComparative Study
In one paragraph

Article in Genes & development, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 471 papers.

0numbers the graph read from it
0cells of the map it votes in
471citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

471 citing papers in PubMed, 750 citations in OpenAlex.

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  15. Cellular Senescence Triggered by Food and Environmental Genotoxins.International journal of molecular sciences · 2026
    Review
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411 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tony S ByunDepartment of Molecular Pharmacology, Stanford University, Stanford, CA 94305, USA.
Marcin Pacek
Muh-ching Yee
Johannes C Walter
Karlene A Cimprich
Stanford University · USHarvard University · US

Funding

TRAINING IN NEONATAL BIOLOGYT32HD007249 · NICHD · STANFORD UNIVERSITY · PI STEVENSON, DAVID K · 1985 to 2013
$4.4M
Properties of the eukaryotic replicative DNA helicaseR01GM062267 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALTER, JOHANNES · 2001 to 2014
$4.1M
Role of ATR in the DNA Damage ResponseR01GM062193 · NIGMS · STANFORD UNIVERSITY · PI CIMPRICH, KARLENE A · 2002 to 2006
$1.4M
NICHD NIH HHS 2T32 HD 07249NICHD NIH HHS T32 HD007249NIGMS NIH HHS GM 062193NIGMS NIH HHS GM 62267NIGMS NIH HHS R01 GM062193NIGMS NIH HHS R01 GM062267
6 · The paper itself

Abstract

The ATR-dependent DNA damage response pathway can respond to a diverse group of lesions as well as inhibitors of DNA replication. Using the Xenopus egg extract system, we show that lesions induced by UV irradiation and cis-platinum cause the functional uncoupling of MCM helicase and DNA polymerase activities, an event previously shown for aphidicolin. Inhibition of uncoupling during elongation with inhibitors of MCM7 or Cdc45, a putative helicase cofactor, results in abrogation of Chk1 phosphorylation, indicating that uncoupling is necessary for activation of the checkpoint. However, uncoupling is not sufficient for checkpoint activation, and DNA synthesis by Polalpha is also required. Finally, using plasmids of varying size, we demonstrate that all of the unwound DNA generated at a stalled replication fork can contribute to the level of Chk1 phosphorylation, suggesting that uncoupling amplifies checkpoint signaling at each individual replication fork. Taken together, these observations indicate that functional uncoupling of MCM helicase and DNA polymerase activities occurs in response to multiple forms of DNA damage and that there is a general mechanism for generation of the checkpoint-activating signal following DNA damage.

Indexed as

DNA DamageAdaptor Proteins, Signal TransducingAnimalsAphidicolinAtaxia Telangiectasia Mutated ProteinsCell Cycle ProteinsCell-Free SystemCheckpoint Kinase 1ChromatinDNA-Directed DNA PolymeraseDNA HelicasesDNA PrimersDNA ReplicationDNA, Single-StrandedPhosphorylationPlasmidsAdaptor Proteins, Signal TransducingAphidicolinAtaxia Telangiectasia Mutated ProteinsAtr protein, XenopusCell Cycle ProteinsCheckpoint Kinase 1Chek1 protein, XenopusChromatinCLSPN protein, XenopusDNA-Directed DNA PolymeraseDNA HelicasesDNA PrimersDNA, Single-StrandedProtein KinasesProtein Serine-Threonine KinasesXenopus Proteins

Identifiers

PMID15833913
PMCPMC1091739
OpenAlexW2029369774

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.