Evidence map›Paper›PMID 15831471›Full record

ArticleMolecular and cellular biology2005

The distal sequence element of the selenocysteine tRNA gene is a tissue-dependent enhancer essential for mouse embryogenesis.

Vincent P Kelly, Takafumi Suzuki, Osamu Nakajima, Tsuyoshi Arai, Yoshitaka Tamai, Satoru Takahashi, Susumu Nishimura, Masayuki Yamamoto

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Review
  3. Methylation profile of bovineJournal of integrative agriculture : JIA · 2016
    Article
  4. Selenoproteins and cardiovascular stress.Thrombosis and haemostasis · 2015
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Vincent P KellyCenter for TARA, University of Tsukuba, 1-1-1 Tennoudai, Tsukuba 305-8577, Japan. masi@tara.tsukuba.ac.jp
Takafumi Suzuki
Osamu Nakajima
Tsuyoshi Arai
Yoshitaka Tamai
Satoru Takahashi
Susumu Nishimura
Masayuki Yamamoto
Life Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance (TARA)University of Tsukuba · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Appropriate expression of the selenocysteine tRNA (tRNA(Sec)) gene is necessary for the production of an entire family of selenoprotein enzymes. This study investigates the consequence of disrupting an upstream enhancer region of the mouse tRNA(Sec) gene (Trsp) known as the distal sequence element (DSE) by use of a conditional repair gene targeting strategy, in which a 3.2-kb insertion was introduced into the promoter of the gene. In the absence of DSE activity, homozygous mice failed to develop in utero beyond embryonic day 7.5 and had severely decreased levels of selenoprotein transcript. Cre-mediated removal of the selection cassette recovered DSE regulation of Trsp, restoring wild-type levels of tRNA(Sec) expression and allowing the generation of viable rescued mice. Further analysis of targeted heterozygous adult mice revealed that the enhancer activity of the DSE is tissue dependent since, in contrast to liver, heart does not require the DSE for normal expression of Trsp. Similarly, in mouse cell lines we showed that the DSE functions as a cell-line-specific inducible element of tRNA(Sec). Together, our data demonstrate that the DSE is a tissue-dependent regulatory element of tRNA(Sec) expression and that its activity is vital for sufficient tRNA(Sec) production during mouse embryogenesis.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsAntioxidantsBase SequenceEmbryo, MammalianEmbryonic DevelopmentEnhancer Elements, GeneticGenes, LethalGene TargetingGlutathione PeroxidaseGlutathione Peroxidase GPX1Heme Oxygenase-1Heme Oxygenase (Decyclizing)LiverMembrane ProteinsMiceAntioxidantsGlutathione PeroxidaseGlutathione Peroxidase GPX1Gpx1 protein, mouseHeme Oxygenase-1Heme Oxygenase (Decyclizing)Hmox1 protein, mouseMembrane ProteinsProteinsRNA, Transfer, Amino Acid-SpecificSelenoproteinstRNA, selenocysteine-

Identifiers

PMID15831471
PMCPMC1084291
OpenAlexW2103987923

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.