Evidence map›Paper›PMID 15831447›Full record

ArticleMolecular and cellular biology2005

Whole-genome analysis reveals a strong positional bias of conserved dMyc-dependent E-boxes.

Toby Hulf, Paola Bellosta, Michael Furrer, Dominik Steiger, David Svensson, Andrew Barbour, Peter Gallant

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 73 citations in OpenAlex.

  1. Review
  2. Connecting Hippo Pathway and Cytoophidia inInternational journal of molecular sciences · 2024
    Article
  3. Article
  4. Frontiers in cell and developmental biology · 2024
    Review
  5. MYC: there is more to it than cancer.Frontiers in cell and developmental biology · 2024
    Review
  6. Article
  7. Article
  8. Observational
  9. Review
  10. Article
  11. Article
  12. Frontiers in genetics · 2019
    Review
  13. PAF1 complex component Leo1 helps recruitProceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Toby HulfUniversität Zürich, Zoologisches Institut, Winterthurerstrasse 190, Zürich 8057, Switzerland.
Paola Bellosta
Michael Furrer
Dominik Steiger
David Svensson
Andrew Barbour
Peter Gallant
University of Zurich · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Myc is a transcription factor with diverse biological effects ranging from the control of cellular proliferation and growth to the induction of apoptosis. Here we present a comprehensive analysis of the transcriptional targets of the sole Myc ortholog in Drosophila melanogaster, dMyc. We show that the genes that are down-regulated in response to dmyc inhibition are largely identical to those that are up-regulated after dMyc overexpression and that many of them play a role in growth control. The promoter regions of these targets are characterized by the presence of the E-box sequence CACGTG, a known dMyc binding site. Surprisingly, a large subgroup of (functionally related) dMyc targets contains a single E-box located within the first 100 nucleotides after the transcription start site. The relevance of this E-box and its position was confirmed by a mutational analysis of a selected dMyc target and by the observation of its evolutionary conservation in a different Drosophila species, Drosophila pseudoobscura. These observations raise the possibility that a subset of Myc targets share a distinct regulatory mechanism.

Indexed as

AnimalsBase SequenceConserved SequenceDNA-Binding ProteinsDNA Mutational AnalysisDown-RegulationDrosophila melanogasterDrosophila ProteinsE-Box ElementsGene Expression RegulationGenes, InsectGenomePromoter Regions, GeneticTranscription FactorsTranscription, GeneticTranscription Initiation SiteDNA-Binding ProteinsDrosophila ProteinsMyc protein, DrosophilaTranscription Factors

Identifiers

PMID15831447
PMCPMC1084277
OpenAlexW2130551449

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.