Evidence map›Paper›PMID 15829587›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2005

Self-limiting nature of seasonal cholera epidemics: Role of host-mediated amplification of phage.

Shah M Faruque, M Johirul Islam, Qazi Shafi Ahmad, A S G Faruque, David A Sack, G Balakrish Nair, John J Mekalanos

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 108 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
108citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

108 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Statistical structure of host-phage interactions.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Pooled it
  2. Article
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  7. Lineage-specific defence systems of pandemicPhilosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
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  15. Bacteriophage-Host Interactions and Coevolution.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  16. Article
  17. Genomic analysis ofHeliyon · 2023
    Article
  18. Article
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  20. Assay for Evaluating the Abundance ofPathogens (Basel, Switzerland) · 2022
    Article

48 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Shah M FaruqueMolecular Genetics Laboratory, International Centre for Diarrhoeal Disease Research Bangladesh, Dhaka-1212, Bangladesh. faruque@icddrb.org
M Johirul Islam
Qazi Shafi Ahmad
A S G Faruque
David A Sack
G Balakrish Nair
John J Mekalanos

Funding

Phages and Genomic Variation in Vibrio Cholerae EvolutionR01GM068851 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MEKALANOS, JOHN JOSEPH · 2003 to 2015
$3.9M
NIGMS NIH HHS GM068851NIGMS NIH HHS R01 GM068851
6 · The paper itself

Abstract

Phage predation of Vibrio cholerae has recently been reported to be a factor that influences seasonal epidemics of cholera in Bangladesh. To understand more about this phenomenon, we studied the dynamics of the V. cholerae-phage interaction during a recent epidemic in Dhaka. Because the outbreak strain causing this epidemic was resistant to multiple antibiotics, including streptomycin, we used a selective medium containing streptomycin to monitor accurately the abundance of this strain in the environment. The changing prevalence in the environment of the epidemic V. cholerae O1 strain and a particular lytic cholera phage (JSF4) to which it was sensitive was measured every 48-72 h for 17 weeks. We also monitored the incidence of phage excretion in stools of 387 cholera patients during the epidemic. The peak of the epidemic was preceded by high V. cholerae prevalence in the environment and was followed by high JSF4 phage levels as the epidemic ended. The buildup to the phage peak in the environment coincided with increasing excretion of the same phage in the stools of cholera patients. These results suggest that patients toward the end of the epidemic ingested both JSF4 phage and the outbreak V. cholerae strain. Host-mediated phage amplification during the cholera epidemic likely contributed to increased environmental phage abundance, decreased load of environmental V. cholerae and, hence, the collapse of the epidemic. Thus, in vivo phage amplification in patients and subsequent phage predation in the environment may explain the self-limiting nature of seasonal cholera epidemics in Bangladesh.

Indexed as

SeasonsBacteriophagesBangladeshCholeraDisease OutbreaksHumansVibrio choleraeWater Microbiology

Identifiers

PMID15829587
PMCPMC1087956

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.