Evidence map›Paper›PMID 15825067›Full record

ArticleGastroenterology2005

Duodenal ulcer promoting gene of Helicobacter pylori.

Hong Lu, Ping-I Hsu, David Y Graham, Yoshio Yamaoka

Open access · bronzeAbstract read
In one paragraph

Article in Gastroenterology, 2005. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 131 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
131citing papers in PubMed, 3 pooled it
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

131 citing papers in PubMed, 3 syntheses or guidelines pooled it, 313 citations in OpenAlex.

  1. Pooled it
  2. Chemoprevention of gastric cancer development afterWorld journal of gastroenterology · 2020
    Pooled it
  3. The association of dupA and Helicobacter pylori-related gastroduodenal diseases.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2010
    Pooled it
  4. Review
  5. Update on the pathogenesis and clinical management ofWorld journal of gastrointestinal pathophysiology · 2025
    Review
  6. Review
  7. Global diversity of integrating conjugative elements (ICEs) inbioRxiv : the preprint server for biology · 2025
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  9. Evaluation of theAnti-cancer agents in medicinal chemistry · 2025
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  10. Virulence · 2024
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  11. Article
  12. Pathogens (Basel, Switzerland) · 2024
    Review
  13. Frontiers in cellular and infection microbiology · 2024
    Article
  14. Implications of lncRNAs inFrontiers in cellular and infection microbiology · 2024
    Review
  15. The immunopathogenesis ofFrontiers in microbiology · 2024
    Review
  16. Study ofCancers · 2023
    Article
  17. Article
  18. Review
  19. Frontiers in cellular and infection microbiology · 2023
    Article
  20. Article

71 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Hong LuDepartment of Medicine/Gastroenterology, Michael E. DeBakey Veterans Affairs Medical Center, Baylor College of Medicine, Houston, Texas 77030, USA.
Ping-I Hsu
David Y Graham
Yoshio Yamaoka
Michael E. DeBakey VA Medical Center · USBaylor College of Medicine · US

Funding

Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI FASIHA KANWAL · 2001 to 2026
$28.3M
REGULATION OF CXC CHEMOKINE EXPRESSION BY H. PYLORIR01DK062813 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI YAMAOKA, YOSHIO · 2004 to 2013
$3.0M
NIDDK NIH HHS DK56338NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R01 DK062813NIDDK NIH HHS R01 DK62813
6 · The paper itself

Abstract

BACKGROUND &

aimsIdentification of a disease-specific H pylori virulence factors predictive of the outcome of infection remains unachieved.

methodsWe used the polymerase chain reaction and Southern blot to compare the presence of 14 vir homologue genes with clinical presentation of H pylori infection, mucosal histology, and mucosal interleukin (IL)-8 levels.

resultsWe examined 500 H pylori strains from East Asia and South America, including 120 with gastritis, 140 with duodenal ulcer (DU), 110 with gastric ulcer (GU), and 130 with gastric cancer. Only 1 gene that encompassed both jhp0917 and jhp0918 called dupA (duodenal ulcer promoting gene) was associated with a specific clinical outcome. dupA was present in 42% of DU vs. 21% of gastritis (adjusted odds ratio [OR] = 3.1, 95% confidence interval [CI]: 1.7-5.7). Its presence was also associated with more intense antral neutrophil infiltration and IL-8 levels and was a marker for protection against gastric atrophy, intestinal metaplasia, and gastric cancer (OR for gastric cancer = 0.42, 95% CI: 0.2-0.9 compared with gastritis). In vitro studies in gastric epithelial cells using dupA -deleted and -complemented mutants showed that the dupA plays roles in IL-8 production, in activation of transcription factors responsible for IL-8 promoter activity, and in increased survivability at low pH.

conclusionsdupA is a novel marker associated with an increased risk for DU and reduced risk for gastric atrophy and cancer. Its association with DU-promoting and -protective effects against atrophy/cancer was evident in both Asian and Western countries.

Indexed as

Genes, BacterialAcidsAmino Acid SequenceBacterial ProteinsDrug ResistanceDuodenal UlcerFemaleGene FrequencyHelicobacter pyloriHumansHydrogen-Ion ConcentrationInterleukin-8Intestinal MucosaMaleMiddle AgedOligonucleotide Array Sequence AnalysisAcidsBacterial ProteinsDupA protein, Helicobacter pyloriInterleukin-8Virulence Factors

Identifiers

PMID15825067
PMCPMC3130061
OpenAlexW2054778956

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.